RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ARG2P78540 354 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 EBPQ15125 230 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SMN1Q16637 294 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TIGD5Q53EQ6 642 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM244Q5VVB8 128 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SHKBP1Q8TBC3 707 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 DVL3Q92997 716 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM103A1Q9BTL3 118 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PLK3Q9H4B4 646 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RDH14Q9HBH5 336 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 APMAPQ9HDC9 416 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM206AQ9NX38 181 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 C19orf53Q9UNZ5 99 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 MYH2Q9UKX2 1941 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ANKRD20A5PA0PJZ0 165 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 YJEFN3A6XGL0 299 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 EEDO75530 441 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SOX14O95416 240 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 GLP2RO95838 553 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 HNRNPA1P09651 372 aaKnown RBP eCLIP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 KIR3DL1P43629 444 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SH3BP2P78314 561 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 EMX2Q04743 252 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ATRAIDQ6UW56 229 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC39A5Q6ZMH5 540 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM213BQ8TBF2 198 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SAT2Q96F10 170 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 MS4A4EQ96PG1 132 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PCGF1Q9BSM1 259 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 SF3B5Q9BWJ5 86 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 LIPGQ9Y5X9 500 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ARL2-SNX15V9GYD0 113 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 CXorf49A8MYA2 514 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 P2RX6O15547 441 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 STK17BO94768 372 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 HPP00738 406 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TNFSF10P50591 281 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PTPRCAPQ14761 206 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PIGZQ86VD9 579 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PRR22Q8IZ63 422 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 DEFB106AQ8N104 65 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF808Q8N4W9 903 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PSMG3Q9BT73 122 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RSG1Q9BU20 258 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 CSTL1Q9H114 145 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 OR2D2Q9H210 308 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FBXO4Q9UKT5 387 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PADI3Q9ULW8 664 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF281Q9Y2X9 895 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ANKRD61A6NGH8 418 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 AHRRA9YTQ3 701 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM233B4DJY2 109 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TRUB2O95900 331 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PEX11BO96011 259 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 GBAP04062 536 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 GJB1P08034 283 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 DRD1P21728 446 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 CSNK1A1P48729 337 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RAB9AP51151 201 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TAS2R50P59544 299 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF154Q13106 437 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 BOP1Q14137 746 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RPE65Q16518 533 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ABCA11PQ4W5N1 156 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM144Q7Z5S9 345 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZC3H3Q8IXZ2 948 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 GJD3Q8N144 294 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 OR5M3Q8NGP4 307 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 DGAT2Q96PD7 388 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TAAR9Q96RI9 348 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FZD8Q9H461 694 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PEF1Q9UBV8 284 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 DEDDO75618 318 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 EDNRAP25101 427 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MIPP30301 263 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 EFEMP1Q12805 493 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ILKQ13418 452 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TRA2AQ13595 282 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SERTAD2Q14140 314 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PLK5Q496M5 336 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 C12orf54Q6X4T0 127 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NUFIP2Q7Z417 695 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 DEFB128Q7Z7B8 93 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PLPP7Q8NBV4 271 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR52E5Q8NH55 327 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NUDCD2Q8WVJ2 157 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CHRDL1Q9BU40 450 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SNRNP25Q9BV90 132 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM27Q9HBJ8 222 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNK6Q9Y257 313 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 RASD1Q9Y272 281 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 WASHC3Q9Y3C0 194 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PGPEP1LA6NFU8 196 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SULT2B1O00204 365 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms