RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 OLIG3Q7RTU3 272 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 BCDIN3DQ7Z5W3 292 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF583Q96ND8 569 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 NRSN2Q9GZP1 204 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PROCRQ9UNN8 238 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 FBXO7Q9Y3I1 522 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 SNX11Q9Y5W9 270 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 LRP5LA4QPB2 252 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 SPINT2O43291 252 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 CTSLP07711 333 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PRKACAP17612 351 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ETV6P41212 452 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 GIPRP48546 466 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 HSF1Q00613 529 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 NKAIN1Q4KMZ8 207 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 STEAP3Q658P3 488 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF529Q6P280 563 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 SLC46A3Q7Z3Q1 461 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 MAML2Q8IZL2 1156 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM185AQ8NFB2 350 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 FOXQ1Q9C009 403 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 LAT2Q9GZY6 243 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 POFUT1Q9H488 388 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM9BQ9NQ34 198 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 TXNL4BQ9NX01 149 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 A0A1W2PS29 197 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 MEIOCA2RUB1 952 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 HMGN4O00479 90 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PAPLNO95428 1278 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 SHC1P29353 583 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ARR3P36575 388 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 MC2RQ01718 297 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 KCNIP4Q6PIL6 250 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 Q6ZSR9 355 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 CPEB2Q7Z5Q1 589 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 SYT9Q86SS6 491 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 DNAJC5GQ8N7S2 189 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PLCXD1Q9NUJ7 323 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ATPIF1Q9UII2 106 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 RAB22AQ9UL26 194 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 KLF13Q9Y2Y9 288 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 RGS11O94810 467 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 RPS23P62266 143 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 CCL7P80098 99 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 GLYR1Q49A26 553 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 CST9LP1Q5W188 147 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 IDO2Q6ZQW0 420 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 CATSPERDQ86XM0 798 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 MRGPRX1Q96LB2 322 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 CSF3RQ99062 836 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PRR14Q9BWN1 585 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF93P35789 620 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 CRMP1Q14194 572 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 HES1Q14469 280 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 SLC10A1Q14973 349 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PDLIM3Q53GG5 364 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 SHEQ5VZ18 495 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 LILRA2Q8N149 483 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 KCTD12Q96CX2 325 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 UHRF2Q96PU4 802 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 GPR173Q9NS66 373 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 C1orf196B1AJZ1 125 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 HS3ST1O14792 307 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF254O75437 659 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 RPL34P49207 117 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 LGALS4P56470 323 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 B3GLCTQ6Y288 498 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 GDPD3Q7L5L3 318 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 TMPRSS7Q7RTY8 843 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 LAX1Q8IWV1 398 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 DND1Q8IYX4 353 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 TEX19Q8NA77 164 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF419Q96HQ0 510 aaPredicted RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 ABHD6Q9BV23 337 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 K7EPK0 472 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 GPR171O14626 319 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 IGHV3-9P01782 118 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 AADACP22760 399 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CAPZBP47756 277 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 MRPL19P49406 292 aaKnown RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SRPXP78539 464 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 EDDM3AQ14507 147 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 BEX5Q5H9J7 111 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 LHFPL2Q6ZUX7 228 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 DOK3Q7L591 496 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 FAM71E2Q8N5Q1 922 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SLC35G3Q8N808 338 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 OR51A2Q8NGJ7 313 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 RBMXL1Q96E39 390 aaKnown RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 TIMD4Q96H15 378 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 IP6K3Q96PC2 410 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF436Q9C0F3 470 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 EGLN1Q9GZT9 426 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SAV1Q9H4B6 383 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SGCEO43556 437 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CDK4P11802 303 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms