RNA–Protein interactions for RNA: ENST00000249504.6

HOXD11-201, Transcript of homeobox D11, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXD11, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-201ENST00000249504 RASD2Q96D21 266 aa17.24■□□□□ 0.35
HOXD11-201ENST00000249504 EMC6Q9BV81 110 aa17.24■□□□□ 0.35
HOXD11-201ENST00000249504 RCE1Q9Y256 329 aa17.24■□□□□ 0.35
HOXD11-201ENST00000249504 A0A087WXM4 84 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 A1L4Q6 167 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 SLC35F4A4IF30 521 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 TRIM64A6NGJ6 449 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 ZNF432O94892 652 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 ACVR1BP36896 505 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 ASCL1P50553 236 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 KRR1Q13601 381 aaKnown RBP17.23■□□□□ 0.35
HOXD11-201ENST00000249504 MESTQ5EB52 335 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 ZNF362Q5T0B9 420 aaPredicted RBP17.23■□□□□ 0.35
HOXD11-201ENST00000249504 SLC35F1Q5T1Q4 408 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 NUFIP2Q7Z417 695 aaKnown RBP17.23■□□□□ 0.35
HOXD11-201ENST00000249504 HDDC2Q7Z4H3 204 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 LUZP2Q86TE4 346 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 ENTHD1Q8IYW4 607 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 RHOXF1Q8NHV9 184 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 TRUB1Q8WWH5 349 aaKnown RBP17.23■□□□□ 0.35
HOXD11-201ENST00000249504 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
HOXD11-201ENST00000249504 NOSIPQ9Y314 301 aaKnown RBP17.23■□□□□ 0.35
HOXD11-201ENST00000249504 A6NIZ1 184 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 MSTNO14793 375 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 SURF4O15260 269 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 HIST1H1CP16403 213 aaKnown RBP17.22■□□□□ 0.35
HOXD11-201ENST00000249504 GABARAPL2P60520 117 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 RAP1BP61224 184 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 RAP1AP62834 184 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 AAED1Q7RTV5 226 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 CNIH3Q8TBE1 160 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 SLC38A2Q96QD8 506 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 OR2M2Q96R28 347 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 OPN3Q9H1Y3 402 aaPredicted RBP17.22■□□□□ 0.35
HOXD11-201ENST00000249504 CMC2Q9NRP2 79 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 RASSF1Q9NS23 344 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 SCN3BQ9NY72 215 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 TVP23BQ9NYZ1 205 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 ICE1Q9Y2F5 2266 aa17.22■□□□□ 0.35
HOXD11-201ENST00000249504 ZNF726A6NNF4 738 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 CLPTM1O96005 669 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 SMIM18P0DKX4 95 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 CD8BP10966 210 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 CRHBPP24387 322 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 SELENOPP49908 381 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 TUBA4AP68366 448 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 RUNX1T1Q06455 604 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.21■□□□□ 0.35
HOXD11-201ENST00000249504 NIPAL3Q6P499 406 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 PTCHD4Q6ZW05 846 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 ADCK1Q86TW2 530 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 TMEM123Q8N131 208 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 OR52E2Q8NGJ4 325 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 OR4K13Q8NH42 304 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 SLC25A44Q96H78 314 aaPredicted RBP17.21■□□□□ 0.35
HOXD11-201ENST00000249504 MRPL13Q9BYD1 178 aaKnown RBP17.21■□□□□ 0.35
HOXD11-201ENST00000249504 PARPBPQ9NWS1 579 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 TPRKBQ9Y3C4 175 aa17.21■□□□□ 0.35
HOXD11-201ENST00000249504 SPTAN1Q13813 2472 aaKnown RBP17.21■□□□□ 0.35
HOXD11-201ENST00000249504 CENPBD1B2RD01 187 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 PRSS44E7EML9 344 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 SLC1A7O00341 560 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 XKRYO14609 159 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 ARHGEF9O43307 516 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 MRPL33O75394 65 aaKnown RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 TRMUO75648 421 aaKnown RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 SLC2A10O95528 541 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 CGAP01215 116 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 IFNGP01579 166 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 PGA4P0DJD7 388 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 PGA3P0DJD8 388 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 CDKN2AP42771 156 aaKnown RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 EFNB1P98172 346 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 CAMK2DQ13557 499 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 APOFQ13790 326 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 SNAPC1Q16533 368 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 ZNF100Q8IYN0 542 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 SNX18Q96RF0 628 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 KCNK17Q96T54 332 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 DDOQ99489 341 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 RBM24Q9BX46 236 aaKnown RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 PLSCR4Q9NRQ2 329 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 JKAMPQ9P055 326 aa17.21■□□□□ 0.34
HOXD11-201ENST00000249504 KLF2Q9Y5W3 355 aaPredicted RBP17.21■□□□□ 0.34
HOXD11-201ENST00000249504 HCFC1P51610 2035 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 IGHG1P01857 330 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 PCYT1AP49585 367 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 SNRPGP62308 76 aaKnown RBP17.2■□□□□ 0.34
HOXD11-201ENST00000249504 LAIR2Q6ISS4 152 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 JAZF1Q86VZ6 243 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 ZNF610Q8N9Z0 462 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 SLC37A3Q8NCC5 494 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 NPEPL1Q8NDH3 523 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 SDR9C7Q8NEX9 313 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 NOXO1Q8NFA2 376 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 BPIFB6Q8NFQ5 453 aa17.2■□□□□ 0.34
HOXD11-201ENST00000249504 OR8J1Q8NGP2 316 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms