RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 HEATR5BQ9P2D3 2071 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ZNF43P17038 809 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TAS2R19P59542 299 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 PRODH2Q9UF12 536 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TTC28Q96AY4 2481 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 CSF2RBP32927 897 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SSX7Q7RTT5 188 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 RXFP4Q8TDU9 374 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 Q96M85 177 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 NPAP1Q9NZP6 1156 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ENSAO43768 121 aaKnown RBP6.93□□□□□ -1.3
RIF1-201ENST00000243326 EGFP01133 1207 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 CREB3L2Q70SY1 520 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 VPS25Q9BRG1 176 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ADAT1Q9BUB4 502 aaKnown RBP6.93□□□□□ -1.3
RIF1-201ENST00000243326 SERTAD3Q9UJW9 196 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SLC22A13Q9Y226 551 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 MPPED1O15442 326 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 C9orf152Q5JTZ5 239 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 CNTN4Q8IWV2 1026 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 PLPP5Q8NEB5 264 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 BPIFCQ8NFQ6 507 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TRBV11-1A0A0K0K1C0 115 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 HHLA1C9JL84 531 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 NPC1O15118 1278 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 YKT6O15498 198 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 CD3DP04234 171 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SERPINE2P07093 398 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 MYF5P13349 255 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TACR3P29371 465 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 MTNR1BP49286 362 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 MALLQ13021 153 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TMEM35AQ53FP2 167 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 CDH26Q8IXH8 852 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 RAB3CQ96E17 227 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 REEP6Q96HR9 211 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SLC46A2Q9BY10 475 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 AQP7P3A6NL99 342 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 VSTM2BA6NLU5 285 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SPINK4O60575 86 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ZDHHC11BP0C7U3 371 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ZNF728P0DKX0 622 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 KCNJ10P78508 379 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 HHEXQ03014 270 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TMEM200AQ86VY9 491 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 RIMKLAQ8IXN7 391 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 HRASLSQ9HDD0 168 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 IMPA1P29218 277 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 BLKP51451 505 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 KIAA1958Q8N8K9 716 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 OR5D14Q8NGL3 314 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ATOH1Q92858 354 aaPredicted RBP6.93□□□□□ -1.3
RIF1-201ENST00000243326 APOBEC3BQ9UH17 382 aaKnown RBP6.93□□□□□ -1.3
RIF1-201ENST00000243326 SHISA8B8ZZ34 492 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ZNHIT1O43257 154 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 PDE7AQ13946 482 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TMEM184AQ6ZMB5 413 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SLC35F3Q8IY50 421 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 FAM3DQ96BQ1 224 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ZFYVE21Q9BQ24 234 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SLC22A23A1A5C7 686 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ASPDHA6ND91 283 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 VEGFDO43915 354 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 NAT2P11245 290 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ABOP16442 354 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ARHGAP11BQ3KRB8 267 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 C1QTNF12Q5T7M4 302 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 MANEALQ5VSG8 457 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 APOOQ9BUR5 198 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 UBQLN3Q9H347 655 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 NT5DC2Q9H857 520 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 FCGR2CP31995 323 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 SNRPEP62304 92 aaKnown RBP6.93□□□□□ -1.3
RIF1-201ENST00000243326 GBX1Q14549 363 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 PYCR3Q53H96 274 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 FIBINQ8TAL6 211 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 ISL2Q96A47 359 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 hCG_1809904A0A1W2PP81 198 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 A0A1W2PR64 198 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 A0A1W2PRV1 198 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 FABP4P15090 132 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 GRAMD2AQ8IUY3 354 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 GPR119Q8TDV5 335 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 HRASLS5Q96KN8 279 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TMEM175Q9BSA9 504 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 TAF9BQ9HBM6 251 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 PCDHGA5Q9Y5G8 931 aa6.93□□□□□ -1.3
RIF1-201ENST00000243326 D6RAR5 112 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 H3BP45 60 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 SULT2B1O00204 365 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 PAPLNO95428 1278 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 SRMP19623 302 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 MEF2DQ14814 521 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 SOHLH1Q5JUK2 328 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 PATE1Q8WXA2 126 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 TMEM43Q9BTV4 400 aa6.92□□□□□ -1.3
RIF1-201ENST00000243326 TMEM100Q9NV29 134 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms