RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 NUP54Q7Z3B4 507 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PLCZ1Q86YW0 608 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 FAM71CQ8NEG0 241 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 OR7G1Q8NGA0 311 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 OR4M1Q8NGD0 313 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 OR9A4Q8NGU2 314 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 LILRB4Q8NHJ6 448 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RPS4Y2Q8TD47 263 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 LIPHQ8WWY8 451 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GHSRQ92847 366 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ZDHHC12Q96GR4 267 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 DGAT2Q96PD7 388 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ERMAPQ96PL5 475 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TBX5Q99593 518 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 WACQ9BTA9 647 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TMEM165Q9HC07 324 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RANGRFQ9HD47 186 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 FAM60AQ9NP50 221 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 EXOSC3Q9NQT5 275 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PRTFDC1Q9NRG1 225 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 MRPL39Q9NYK5 338 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 VSX1Q9NZR4 365 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 COPZ2Q9P299 210 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 MALT1Q9UDY8 824 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SLC6A5Q9Y345 797 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF337Q9Y3M9 751 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ALG5Q9Y673 324 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TRANK1O15050 2925 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ARPC4-TTLL3A0A0A6YYG9 625 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 A0A0G2JMP0 313 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 A0A0X1KG70 313 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 LILRA5A6NI73 299 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PSMD9O00233 223 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 IMPA2O14732 288 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CTDSPLO15194 276 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 OR7A10O76100 309 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 UBL3O95164 117 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SPDEFO95238 335 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 UCHL1P09936 223 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 THEGLP0DJG4 465 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CT45A8P0DMV1 189 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CT45A9P0DMV2 189 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PNMTP11086 282 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ARSBP15848 533 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PTNP21246 168 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 AHCYP23526 432 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 LCN1P31025 176 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PYCR1P32322 319 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 GRK6P43250 576 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 FASLGP48023 281 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SLC25A1P53007 311 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 RAG2P55895 527 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 OR12D2P58182 307 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 RRAS2P62070 204 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SIRPAP78324 504 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SLC3A1Q07837 685 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 MAB21L1Q13394 359 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 FOXE3Q13461 319 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 TNK1Q13470 666 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 GPR176Q14439 515 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CT45A2Q5DJT8 189 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 UNQ9370/PRO34162Q6UXP9 181 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 NPSR1Q6W5P4 371 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PARGQ86W56 976 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SLC35F2Q8IXU6 374 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 FAM109AQ8N4B1 249 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF614Q8N883 585 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 SAMD12Q8N8I0 201 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 Q8N9G6 341 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 CYB561A3Q8NBI2 242 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 C17orf47Q8NEP4 570 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 OR4M2Q8NGB6 313 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 OR52E2Q8NGJ4 325 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 TRMT10AQ8TBZ6 339 aaKnown RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ZFAND1Q8TCF1 268 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 DOK4Q8TEW6 326 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 UPRTQ96BW1 309 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 ART5Q96L15 291 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 DDOQ99489 341 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 THAP7Q9BT49 309 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 GTPBP2Q9BX10 602 aaKnown RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 NMNAT2Q9BZQ4 307 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 NDEL1Q9GZM8 345 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 HDHD2Q9H0R4 259 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 PPIL3Q9H2H8 161 aaKnown RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 TCEAL2Q9H3H9 227 aaPredicted RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 NRIP3Q9NQ35 241 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 NLKQ9UBE8 527 aa7.11□□□□□ -1.27
CXCR4-201ENST00000241393 LAMA2P24043 3122 aaKnown RBP7.11□□□□□ -1.27
CXCR4-201ENST00000241393 A0A0A6YYC8 382 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-201ENST00000241393 C7orf66A4D0T2 115 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 SLC9B1P1A6NJY1 282 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF879B4DU55 563 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 H0YIG0 161 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 I3L1I5 382 aaPredicted RBP7.1□□□□□ -1.27
CXCR4-201ENST00000241393 PDCD5O14737 125 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 FLRT2O43155 660 aa7.1□□□□□ -1.27
CXCR4-201ENST00000241393 GSTZ1O43708 216 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms