RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 A8MXE2 369 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 TP53I11O14683 189 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 OR8U9P0C7N5 309 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 PSMB6P28072 239 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 PPM1FP49593 454 aaPredicted RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 CDK5R1Q15078 307 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 DUSP5Q16690 384 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 NAXEQ8NCW5 288 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 OR13C3Q8NGS6 347 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 OR8U1Q8NH10 309 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 NEK7Q8TDX7 302 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 DCUN1D4Q92564 292 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 ATG10Q9H0Y0 220 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 KCNG2Q9UJ96 466 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 CSAG2Q9Y5P2 127 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 V9GY05 133 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 HMGN4O00479 90 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 LRP3O75074 770 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SLC35G4P0C7Q5 338 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SULT1A2P50226 295 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 NR0B2Q15466 257 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 AWAT2Q6E213 333 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 FAM71E1Q6IPT2 247 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 FAM151BQ6UXP7 276 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 ZNF433Q8N7K0 673 aaPredicted RBP11.87□□□□□ -0.51
MSH2-201ENST00000233146 NPRL2Q8WTW4 380 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SLC25A31Q9H0C2 315 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SLC25A18Q9H1K4 315 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 SGK2Q9HBY8 427 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 STEAP1Q9UHE8 339 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
MSH2-201ENST00000233146 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 NSA2O95478 260 aaKnown RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 GBAP04062 536 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 OR1E1P30953 314 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ID4P47928 161 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 CSNK1DP48730 415 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 PRPF38BQ5VTL8 546 aaKnown RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 GRHL2Q6ISB3 625 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 JAGN1Q8N5M9 183 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 PCSK9Q8NBP7 692 aaKnown RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 CLEC1AQ8NC01 280 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 DVL3Q92997 716 aaPredicted RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 ADGRG7Q96K78 797 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 RNF126Q9BV68 326 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 SLCO1B1Q9Y6L6 691 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 TVP23AA6NH52 213 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 HSPA12AO43301 675 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ALOX12BO75342 701 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 MRPL3P09001 348 aaKnown RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 PDX1P52945 283 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 ZNF529Q6P280 563 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 SLC35F3Q8IY50 421 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 GAL3ST2Q9H3Q3 398 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 CUTCQ9NTM9 273 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 CHRNA9Q9UGM1 479 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 PRAMEF27A3QJZ7 478 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 TMEM235A6NFC5 223 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 KLF4O43474 513 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
MSH2-201ENST00000233146 THEGLP0DJG4 465 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 BEX3Q00994 111 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 CNTN1Q12860 1018 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 KCNMB1Q16558 191 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 FKBP1CQ5VVH2 108 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 SAMD8Q96LT4 415 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ASB8Q9H765 288 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 PARD6AQ9NPB6 346 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 ATG4BQ9Y4P1 393 aa11.86□□□□□ -0.51
MSH2-201ENST00000233146 A6NNC1 897 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 CDRT15L2A8MXV6 281 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 M0QZK8 103 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 TXNDC12O95881 172 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 C8GP07360 202 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 GUSBP08236 651 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 CLUP10909 449 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 HOXD9P28356 352 aaPredicted RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 GJA4P35212 333 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms