RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 DRAXINQ8NBI3 349 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 AKAP1Q92667 903 aaKnown RBP eCLIP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 MCHR2Q969V1 340 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 SLCO4A1Q96BD0 722 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 FOXC2Q99958 501 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 TXNIPQ9H3M7 391 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 INIPQ9NRY2 104 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 SCOCQ9UIL1 159 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 RNF115Q9Y4L5 304 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 TLN2Q9Y4G6 2542 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 EFCAB9A8MZ26 197 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 OVOL3O00110 214 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ABCD4O14678 606 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 BCL10O95999 233 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 TP53P04637 393 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-201ENST00000230480 PATE4P0C8F1 98 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 CALCRP30988 508 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 PRPS1P60891 318 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 IL1RL1Q01638 556 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 HGFACQ04756 655 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 FMODQ06828 376 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 HMBOX1Q6NT76 420 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 SPNS3Q6ZMD2 512 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 TMEM179BQ7Z7N9 219 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ZDHHC21Q8IVQ6 265 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 GPR137CQ8N3F9 429 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 NABP1Q96AH0 204 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ASB9Q96DX5 294 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ADAD1Q96M93 576 aaKnown RBP11.94□□□□□ -0.5
VEGFA-201ENST00000230480 BTBD10Q9BSF8 475 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ADAM18Q9Y3Q7 739 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 LYVE1Q9Y5Y7 322 aa11.94□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF726A6NNF4 738 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 M0R1B8 84 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 DHHO43323 396 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 OR6A2O95222 327 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 SLC2A10O95528 541 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HLA-HP01893 362 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HIST1H2ABP04908 130 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 FABP3P05413 133 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CD3EP07766 207 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 QDPRP09417 244 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CECR9P0C854 216 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-201ENST00000230480 B4GALT1P15291 398 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CBR1P16152 277 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HOXC12P31275 282 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 RRM2P31350 389 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 GSSP48637 474 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CSNK1A1P48729 337 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ART1P52961 327 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CTXN1P60606 82 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ERVK-25P63136 954 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 TGFBR3Q03167 851 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ZBED5Q49AG3 693 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 C10orf128Q5T292 105 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 C11orf71Q6IPW1 123 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 C1orf94Q6P1W5 598 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HIST3H2AQ7L7L0 130 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 OAFQ86UD1 273 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 MDP1Q86V88 176 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 DHFR2Q86XF0 187 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 SYT14Q8NB59 555 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 HIST1H2ACQ93077 130 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF566Q969W8 418 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 Q96M85 177 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 FOXB1Q99853 325 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 MMADHCQ9H3L0 296 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-201ENST00000230480 ESRP2Q9H6T0 727 aaKnown RBP11.93□□□□□ -0.5
VEGFA-201ENST00000230480 NRIP3Q9NQ35 241 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 TMEM38BQ9NVV0 291 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 SLC7A8Q9UHI5 535 aa11.93□□□□□ -0.5
VEGFA-201ENST00000230480 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ATP6V1G2-DDX39BF2Z307 99 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 KRT33AO76009 404 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 GADD45GO95257 159 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 PAX1P15863 534 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF14P17017 642 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 PTAFRP25105 342 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 SLC9A3P48764 834 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 RPL27P61353 136 aaKnown RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ADAM8P78325 824 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 TRAP1Q12931 704 aaKnown RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 KPNB1Q14974 876 aaKnown RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ETFDHQ16134 617 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms