RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ABCA7Q8IZY2 2146 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 VSTM2BA6NLU5 285 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 MEN1O00255 615 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 GPR171O14626 319 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 HLA-DQB1P01920 261 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 CXCL3P19876 107 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 VAMP1P23763 118 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 PRKXP51817 358 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 PLA1AQ53H76 456 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 C1QL3Q5VWW1 255 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 DVL3Q92997 716 aaPredicted RBP13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF587Q96SQ5 575 aaPredicted RBP13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 NUDT9Q9BW91 350 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 PPP4R1LQ9P1A2 415 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 PFDN2Q9UHV9 154 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 ICAM5Q9UMF0 924 aa13.58□□□□□ -0.23
UBE2D4-201ENST00000222402 ST3GAL2Q16842 350 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 NUDT22Q9BRQ3 303 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF436Q9C0F3 470 aaPredicted RBP13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 SLCO1C1Q9NYB5 712 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 COQ3Q9NZJ6 369 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 CCDC85CA6NKD9 419 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 AKR7A3O95154 331 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 RAD52P43351 418 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 POLR2HP52434 150 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 NKPD1Q17RQ9 610 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 C1orf140Q5VVS0 124 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 TEX19Q8NA77 164 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 CCNL2Q96S94 520 aaPredicted RBP13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 LAT2Q9GZY6 243 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 FKRPQ9H9S5 495 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 STEAP1Q9UHE8 339 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 SPEF1Q9Y4P9 236 aa13.58□□□□□ -0.24
UBE2D4-201ENST00000222402 PRR19A6NJB7 356 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 GOSR2O14653 212 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 GMDSO60547 372 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF117Q03924 483 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 FUT7Q11130 342 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 HHLA2Q9UM44 414 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 TMEM269A0A1B0GVZ9 245 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 RAB3DO95716 219 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 HRGP04196 525 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 CSF1P09603 554 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC2A5P22732 501 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 NANOS3P60323 173 aaKnown RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ACTBP60709 375 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 RPL27P61353 136 aaKnown RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ACTG1P63261 375 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 GALK2Q01415 458 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 PHF19Q5T6S3 580 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 COMMD7Q86VX2 200 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF584Q8IVC4 421 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 OR4K17Q8NGC6 315 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 PTTG3PQ9NZH4 202 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 OR5V1Q9UGF6 321 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 HIF3AQ9Y2N7 669 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF726A6NNF4 738 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 TGFBR3LH3BV60 316 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 SIX6O95475 246 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 AKAIN1P0CW23 69 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 CALCBP10092 127 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 TOMM34Q15785 309 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 CASTOR1Q8WTX7 329 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 FAM46BQ96A09 425 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 GAS2L1Q99501 681 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 C2orf42Q9NWW7 574 aa13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 CGGBP1Q9UFW8 167 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 MRM2Q9UI43 246 aaKnown RBP13.57□□□□□ -0.24
UBE2D4-201ENST00000222402 LILRA5A6NI73 299 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 A8MVM7 634 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 SULT1B1O43704 296 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 LIPCP11150 499 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 NME1P15531 152 aaKnown RBP13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 RIN1Q13671 783 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 CHRDL2Q6WN34 429 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 PXKQ7Z7A4 578 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ATG4DQ86TL0 474 aaPredicted RBP13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ASB17Q8WXJ9 295 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF649Q9BS31 505 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 LYPD3O95274 346 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ADRB1P08588 477 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 P2RX1P51575 399 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 COL28A1Q2UY09 1125 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 CDNFQ49AH0 187 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 GLYATL3Q5SZD4 288 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 TMEM205Q6UW68 189 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 OR11H7Q8NGC8 314 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 TSPAN32Q96QS1 320 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 MNTQ99583 582 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 C5orf42Q9H799 3197 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms