RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SLC35D2Q76EJ3 337 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ABHD4Q8TB40 342 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 DNAJA4Q8WW22 397 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 ZNF501Q96CX3 271 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 RNF170Q96K19 258 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SLC46A1Q96NT5 459 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 HDHD2Q9H0R4 259 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 GAREM1Q9H706 876 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 CHRNA9Q9UGM1 479 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 PRR32B1ATL7 298 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SCRG1O75711 98 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 HIST1H2ABP04908 130 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 CSF3P09919 207 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SPI1P17947 270 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 IL11P20809 199 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 MPLP40238 635 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 INPP1P49441 399 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 MELKQ14680 651 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 PAN3Q58A45 887 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 WBP2NLQ6ICG8 309 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 TCEAL6Q6IPX3 200 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 HIST3H2AQ7L7L0 130 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SLC35F2Q8IXU6 374 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ARIH2OSQ8N7S6 290 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 NPEPL1Q8NDH3 523 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 OR6N2Q8NGY6 317 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 DAZLQ92904 295 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 GCDHQ92947 438 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 HIST1H2ACQ93077 130 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 TCEAL3Q969E4 200 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ZFP3Q96NJ6 502 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 CNN2Q99439 309 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 ULBP3Q9BZM4 244 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SRRQ9GZT4 340 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 WWTR1Q9GZV5 400 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 POLE3Q9NRF9 147 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 EPHA6Q9UF33 1036 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 A0A075B6Q4 140 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 EFCAB7A8K855 629 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SLC25A12O75746 678 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 RGS9O75916 674 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 RAB3AP20336 220 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 EPHA8P29322 1005 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 HOXA1P49639 335 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 FOXK1P85037 733 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ELAVL1Q15717 326 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 Q8N402 240 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 THEM6Q8WUY1 208 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ADIPOR1Q96A54 375 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 PELI1Q96FA3 418 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 GFM1Q96RP9 751 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 ATF6BQ99941 703 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ZNF426Q9BUY5 554 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 C11orf54Q9H0W9 315 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 WDR76Q9H967 626 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 NIT2Q9NQR4 276 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 OCIAD1Q9NX40 245 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 MED11Q9P086 117 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 EXTL2Q9UBQ6 330 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 DLL1O00548 723 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ELK1P19419 428 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 BIKQ13323 160 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 SQSTM1Q13501 440 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ETFDHQ16134 617 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 C9orf152Q5JTZ5 239 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 SERPINA12Q8IW75 414 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 D2HGDHQ8N465 521 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 OR4D9Q8NGE8 314 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 MRPL48Q96GC5 212 aaKnown RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 ZNF578Q96N58 590 aaPredicted RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 VRK1Q99986 396 aaPredicted RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 ALG12Q9BV10 488 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 RIMS4Q9H426 269 aaPredicted RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 GRHPRQ9UBQ7 328 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 KLHDC2Q9Y2U9 406 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ZNF337Q9Y3M9 751 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 G3V3Y1 287 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 H3BMH7 237 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 GATCO43716 136 aaKnown RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 IGKV3-11P04433 115 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 PSMD4P55036 377 aaKnown RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 ZNF74Q16587 644 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 MEP1BQ16820 701 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 NKAIN1Q4KMZ8 207 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 TRIQKQ629K1 86 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 DPY19L4Q7Z388 723 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ATG4DQ86TL0 474 aaPredicted RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 CHAC2Q8WUX2 184 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 THAP4Q8WY91 577 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ADAD1Q96M93 576 aaKnown RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 SPSB2Q99619 263 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 ARRDC1-AS1Q9H2J1 176 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms