RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TOR1AO14656 332 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 BET1O15155 118 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 EGFP01133 1207 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 CSN2P05814 226 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 FGF2P09038 288 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 CCKBRP32239 447 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 KIR2DL1P43626 348 aaPredicted RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 KIR3DL2P43630 455 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 ZNF141Q15928 474 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 NDUFAF7Q7L592 441 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 ZNF227Q86WZ6 799 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 EXD3Q8N9H8 876 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 C16orf52Q8NHV5 167 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 SYT4Q9H2B2 425 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 POFUT1Q9H488 388 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 KCNG2Q9UJ96 466 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 CD14P08571 375 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ST6GAL1P15907 406 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 RAB38P57729 211 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 RPS4XP62701 263 aaKnown RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 MRPS10P82664 201 aaKnown RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 DMWDQ09019 674 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 BAMBIQ13145 260 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 NFATC4Q14934 902 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ITPRIPL2Q3MIP1 535 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 MESTQ5EB52 335 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ARHGAP40Q5TG30 622 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 SLC6A19Q695T7 634 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 LRFN4Q6PJG9 635 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 TSEN15Q8WW01 171 aaKnown RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 LPAR4Q99677 370 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 MED11Q9P086 117 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PLGP00747 810 aaPredicted RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 MST1P26927 711 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 MECP2P51608 486 aaKnown RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ATXN7L3Q14CW9 347 aaPredicted RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 ZNF74Q16587 644 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PARM1Q6UWI2 310 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 OVCH2Q7RTZ1 564 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 CDC20BQ86Y33 519 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 CDH26Q8IXH8 852 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 FGF14Q92915 247 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 SLC25A28Q96A46 364 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 MRPS24Q96EL2 167 aaKnown RBP12.72□□□□□ -0.37
USH1C-201ENST00000005226 MNTQ99583 582 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 WDR13Q9H1Z4 485 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 Q9N2J8 555 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 ETV7Q9Y603 341 aa12.72□□□□□ -0.37
USH1C-201ENST00000005226 HMSDA8MTL9 139 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 SDC3O75056 442 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 PRPS1P60891 318 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 EGR4Q05215 589 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 RPL18Q07020 188 aaKnown RBP12.71□□□□□ -0.37
USH1C-201ENST00000005226 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 OR10K2Q6IF99 312 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 ANKRD16Q6P6B7 361 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 LRRC75AQ8NAA5 344 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 AVL9Q8NBF6 648 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 OR5M9Q8NGP3 310 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 RSC1A1Q92681 617 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 SEC22AQ96IW7 307 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 LRFN5Q96NI6 719 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 TSPAN32Q96QS1 320 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 TINAGL1Q9GZM7 467 aaPredicted RBP12.71□□□□□ -0.37
USH1C-201ENST00000005226 APMAPQ9HDC9 416 aa12.71□□□□□ -0.37
USH1C-201ENST00000005226 CDV3Q9UKY7 258 aaKnown RBP12.71□□□□□ -0.37
USH1C-201ENST00000005226 LOC100509620A0A075B734 347 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 TRAV14DV4A0A0A6YYC5 116 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 C2orf74A8MZ97 194 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 CCSO14618 274 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 KCNAB3O43448 404 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 HLA-DQA2P01906 255 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 FAUP35544 74 aaKnown RBP12.71□□□□□ -0.38
USH1C-201ENST00000005226 C1orf61Q13536 156 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 TMEM240Q5SV17 173 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 DNM1P46Q6ZS02 220 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms