RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CD40LGP29965 261 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 STARD6P59095 220 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PIWIL3Q7Z3Z3 882 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PRSS42Q7Z5A4 293 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 NUDT8Q8WV74 236 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 TMEM106AQ96A25 262 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 EID2BQ96D98 161 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 LRRC3BQ96PB8 259 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 CRLF2Q9HC73 371 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 C12orf4Q9NQ89 552 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 IL1AP01583 271 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 CAPNS1P04632 268 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SBK3P0C264 359 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PWWP2BQ6NUJ5 590 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC22A25Q6T423 547 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 B3GLCTQ6Y288 498 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 BRIX1Q8TDN6 353 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 WDR34Q96EX3 536 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 TMEM68Q96MH6 324 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 TP63Q9H3D4 680 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC22A11Q9NSA0 550 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 MRPS28Q9Y2Q9 187 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 MED16Q9Y2X0 877 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 BCAS1O75363 584 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 AGTR1P30556 359 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PPP5CP53041 499 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SMN1Q16637 294 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC22A24Q8N4F4 322 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ZFAND1Q8TCF1 268 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 NRG4Q8WWG1 115 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 GHSRQ92847 366 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 RTL8AQ9BWD3 113 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 NOX4Q9NPH5 578 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 NRIP3Q9NQ35 241 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC25A37Q9NYZ2 338 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PSORS1C1Q9UIG5 152 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 OR2W5A6NFC9 320 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 C21orf140B9A014 251 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PRKNO60260 465 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 HTR2CP28335 458 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ERP29P30040 261 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 EIF2S3P41091 472 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 FOXF1Q12946 379 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 YIF1BQ5BJH7 314 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 GALNT16Q8N428 558 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 OR6F1Q8NGZ6 308 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 C17orf50Q8WW18 174 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ACER3Q9NUN7 267 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF226Q9NYT6 803 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 RNF212BA8MTL3 300 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 H7C1Q1 480 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 CX3CR1P49238 355 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 IDH3GP51553 393 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 TAS2R46P59540 309 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 CYCSP99999 105 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 RAB31Q13636 194 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC46A3Q7Z3Q1 461 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 CT55Q8WUE5 264 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 PHYHIPQ92561 330 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
NIPAL3-201ENST00000003912 ACOD1A6NK06 481 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 NOTOA8MTQ0 251 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 PATE3B3GLJ2 98 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF701M0R085 212 aaPredicted RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 TBX19O60806 448 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF780AO75290 641 aaPredicted RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ABCD3P28288 659 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 SNRPGP62308 76 aaKnown RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 FGFBP1Q14512 234 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 NKAIN3Q8N8D7 197 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ACBD4Q8NC06 268 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 SEMA6DQ8NFY4 1073 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 OR4N2Q8NGD1 307 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 NDNFQ8TB73 568 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 CCDC86Q9H6F5 360 aaKnown RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 PIGLQ9Y2B2 252 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ANKRD12Q6UB98 2062 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 M0R1B8 84 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 CA5AP35218 305 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 EMDP50402 254 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 LGALS4P56470 323 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 RPL18Q07020 188 aaKnown RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF169Q14929 603 aaPredicted RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 UBE2UQ5VVX9 321 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 DOK3Q7L591 496 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 LRRC28Q86X40 367 aaPredicted RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 C1QTNF6Q9BXI9 259 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 TP53TG5Q9Y2B4 290 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 SPAARA0A1B0GVQ0 90 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC16A6O15403 523 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 SELENOFO60613 162 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF254O75437 659 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 IL3RAP26951 378 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 MEOX1P50221 254 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 NKG7Q16617 165 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 KDM4DQ6B0I6 523 aa9.44□□□□□ -0.9
NIPAL3-201ENST00000003912 CENPSQ8N2Z9 138 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms