RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Nop16Q9CPT5 178 aaKnown RBP13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Q9CZV2 255 aa13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 D10Jhu81eQ9D172 266 aa13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Lmntd1Q9D4C1 413 aa13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Nrip2Q9JHR9 270 aa13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Decr2Q9WV68 292 aa13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Actl6aQ9Z2N8 429 aaKnown RBP13.18□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cd300ld4A2A7W1 245 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Pramef6A2A8M8 474 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Zfp362B1ASA5 418 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm3636E9Q5P1 227 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Bbip1J3QMK2 67 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm8660K7N6J2 305 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm3239L7N2D9 227 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gpr52P0C5J4 361 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Fcer1aP20489 250 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Rac3P60764 192 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Vmn1r11Q3SXA2 299 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Syce1lQ5D525 247 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Nlrc3Q5DU56 1064 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Fstl4Q5STE3 841 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cd300ld3Q6SJQ5 245 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr1349Q7TQV1 317 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Prap1Q80XD8 149 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Baiap2Q8BKX1 535 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Stk32cQ8QZV4 488 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr1232Q8VEX7 311 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr1377Q8VGH1 307 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr683Q8VGV1 319 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr561Q8VGZ6 314 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 St3gal4Q91Y74 333 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Mrgprb4Q91ZC0 321 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Tssk6Q925K9 273 aa13.17□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Fam90a1aA2A4E2 429 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Slc25a53A2AF28 346 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Susd1E9Q3H4 752 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm6465F7A7Y6 181 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Rnpepl1G5E872 720 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Dpm1O70152 260 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Lmx1bO88609 395 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Igh-1aP01865 398 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Irf1P15314 329 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Rpl18P35980 188 aaKnown RBP13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gstm5P48774 224 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cdc42P60766 191 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 MestQ07646 335 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Slc25a33Q3TZX3 320 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Entpd6Q3U0P5 455 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cyb561Q60720 250 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Csnk2a1Q60737 391 aaKnown RBP13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr151Q60893 309 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Eid2Q6X7S9 236 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Tas2r110Q7M712 333 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Lamp3Q7TST5 411 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Mgat4bQ812F8 548 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Poldip3Q8BG81 420 aaKnown RBP13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Zfp9Q8BIS1 454 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Mab21l2Q8BPP1 359 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm9999Q8C5Y2 53 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Slc49a3Q8CE47 516 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Grk5Q8VEB1 590 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr658Q8VGV5 323 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr572Q8VGZ3 318 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr676Q8VGZ9 317 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Frs3Q91WJ0 492 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Steap4Q923B6 470 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gdpd3Q99LY2 330 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Atp5f1Q9CQQ7 256 aaKnown RBP13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Asb12Q9D738 308 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 SpastQ9QYY8 614 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Slc22a21Q9WTN6 564 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Avpr1bQ9WU02 421 aa13.16□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Ahctf1Q8CJF7 2243 aaKnown RBP13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr65A0A1B0GSF4 315 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 A0A1L1SR50 188 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 BC024063A0A1W2P7G7 749 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr1215A3KGY3 312 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm438B1ASB3 393 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Btbd8D3YUB6 377 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Casp16-psI6L890 176 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Vmn1r16K7N775 303 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 H2-ObO35424 271 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Atxn2O70305 1285 aaKnown RBP13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Psmb9P28076 219 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 BgnP28653 369 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Sox6P40645 827 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Foxk1P42128 719 aaKnown RBP13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Dpagt1P42867 410 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Clec10aP49300 304 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 TstP52196 297 aaKnown RBP13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 RidaP52760 135 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Zdhhc2P59267 366 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Zdhhc11Q14AK4 347 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Gm136Q3V037 328 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Foxd3Q61060 465 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cd53Q61451 219 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Surf4Q64310 269 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Myl12aQ6ZWQ9 172 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Cpeb3Q7TN99 716 aa13.15□□□□□ -0.3
Ercc1-201ENSMUST00000003645 Olfr1229Q7TQZ9 311 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms