RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 OR10AC1Q8NH08 325 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 HAVCR2Q8TDQ0 301 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 C8orf44Q96CB5 159 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 GFM1Q96RP9 751 aaKnown RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 WDR77Q9BQA1 342 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 MARVELD1Q9BSK0 173 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 DUSP23Q9BVJ7 150 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 MFRPQ9BY79 579 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 SLCO1C1Q9NYB5 712 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 B9D1Q9UPM9 204 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 PCDHGA9Q9Y5G4 932 aaKnown RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 EXPH5Q8NEV8 1989 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 CACNA1EQ15878 2313 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 PRSS37A4D1T9 235 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 PLPP3O14495 311 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 GDF9O60383 454 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 DXOO77932 396 aaKnown RBP15.3■□□□□ 0.04
PHGDH-229ENST00000641891 PDGFBP01127 241 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-229ENST00000641891 ANKRD34CP0C6C1 535 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 HLA-DOBP13765 273 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 PNLIPP16233 465 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 SLC6A1P30531 599 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 SLC35D2Q76EJ3 337 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 KCTD20Q7Z5Y7 419 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 CMTM4Q8IZR5 234 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 BMPERQ8N8U9 685 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 YIPF5Q969M3 257 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 ULBP3Q9BZM4 244 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 MOV10Q9HCE1 1003 aaKnown RBP15.3■□□□□ 0.04
PHGDH-229ENST00000641891 MED11Q9P086 117 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 RARRES3Q9UL19 164 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 CACNG2Q9Y698 323 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 ALPK2Q86TB3 2170 aa15.3■□□□□ 0.04
PHGDH-229ENST00000641891 IFITM5A6NNB3 132 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 SHISA8B8ZZ34 492 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 SLC16A7O60669 478 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 AHSA1O95433 338 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 HLA-DMAP28067 261 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 SLC26A5P58743 744 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 DCDP81605 110 aaKnown RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PMS2CLQ68D20 193 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 ARSKQ6UWY0 536 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PRSS35Q8N3Z0 413 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 EID2Q8N6I1 236 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 OR51A4Q8NGJ6 313 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 NSMAFQ92636 917 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 AKIRIN1Q9H9L7 192 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 SUSD2Q9UGT4 822 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 VDAC3Q9Y277 283 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 UBL3O95164 117 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 OR6A2O95222 327 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 CTLA4P16410 223 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 SDHBP21912 280 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 EMP2P54851 167 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 MEP1BQ16820 701 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 Q499Y3 187 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PLA1AQ53H76 456 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 FAM199XQ6PEV8 388 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 LRRN1Q6UXK5 716 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 WDFY1Q8IWB7 410 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 DNAAF1Q8NEP3 725 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 OR2G2Q8NGZ5 317 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 PIGKQ92643 395 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 GCDHQ92947 438 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 HGDQ93099 445 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 ARL5BQ96KC2 179 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 TXNIPQ9H3M7 391 aa15.29■□□□□ 0.04
PHGDH-229ENST00000641891 MRPL22Q9NWU5 206 aaKnown RBP15.29■□□□□ 0.04
PHGDH-229ENST00000641891 OR4C45A6NMZ5 311 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 INMT-MINDY4F8WBC2 141 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 AIPO00170 330 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF593O00488 134 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ITGA10O75578 1167 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ADRA2CP18825 462 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 EGR3Q06889 387 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 SQSTM1Q13501 440 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 EFR3AQ14156 821 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 UBE2NLQ5JXB2 153 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF385CQ66K41 422 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-229ENST00000641891 PRR23CQ6ZRP0 262 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 OTOSQ8NHW6 89 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 SLC25A38Q96DW6 304 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 AUNIPQ9H7T9 357 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 OCIAD1Q9NX40 245 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 BOLA1Q9Y3E2 137 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ADAMTS9Q9P2N4 1935 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 TNRC6BQ9UPQ9 1833 aaKnown RBP15.28■□□□□ 0.04
PHGDH-229ENST00000641891 PI4KAP42356 2102 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 IGLV1-36A0A0B4J1U3 117 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 TRBV5-5A0A0J9YX44 114 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ANKUB1A6NFN9 424 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 FTCDNL1E5RQL4 147 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 PDCD5O14737 125 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ORC5O43913 435 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 WNT11O96014 354 aa15.28■□□□□ 0.04
PHGDH-229ENST00000641891 ARSBP15848 533 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms