RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 MPDZO75970 2070 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 A0A0J9YW62 118 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 FAM166BA8MTA8 275 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 NPIPA5E9PKD4 350 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 H7C1C5 153 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 J3QRE1 110 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 MYL12BO14950 172 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 TRMUO75648 421 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 CEACAM4O75871 244 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 IGHA1P01876 353 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 DAP3P51398 398 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 P2RY4P51582 365 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 LCN6P62502 163 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 HSF1Q00613 529 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 MELKQ14680 651 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 PON3Q15166 354 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 MED22Q15528 200 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 TIGD6Q17RP2 521 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 CNPY1Q3B7I2 92 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 PXKQ7Z7A4 578 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 TMEM178AQ8NBL3 297 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 GALNT11Q8NCW6 608 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 PROKR2Q8NFJ6 384 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 OR51L1Q8NGJ5 315 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 ZNRF4Q8WWF5 429 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 ASB10Q8WXI3 467 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 ZMYND19Q96E35 227 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 YIPF6Q96EC8 236 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 COG8Q96MW5 612 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 OR5M11Q96RB7 305 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 SNX18Q96RF0 628 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 MND1Q9BWT6 205 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 JAM3Q9BX67 310 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 ADGRL4Q9HBW9 690 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 RPRD1BQ9NQG5 326 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 B3GAT1Q9P2W7 334 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 NPIPA1Q9UND3 350 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 LSM2Q9Y333 95 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 SPENQ96T58 3664 aaKnown RBP11.72□□□□□ -0.53
PHGDH-221ENST00000641573 CACNA1DQ01668 2161 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 CELSR2Q9HCU4 2923 aa11.72□□□□□ -0.53
PHGDH-221ENST00000641573 A6NIZ1 184 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 NPIPB13A6NJU9 1138 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 AQP7P3A6NL99 342 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF814B7Z6K7 855 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 NPIPB4C9JG80 1138 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 LINC01387J3KSC0 135 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 TNFSF11O14788 317 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 SEC14L5O43304 696 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 GLCEO94923 617 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 BCL10O95999 233 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 SBK2P0C263 348 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 LIMS3P0CW19 117 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 LIMS4P0CW20 117 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 IFNGR1P15260 489 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 POU3F2P20265 443 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 GNLYP22749 145 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 PYCR1P32322 319 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 TNFSF10P50591 281 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 RAP1BP61224 184 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 RAP1AP62834 184 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 PPIAP62937 165 aaKnown RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 POU3F1Q03052 451 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 POU4F2Q12837 409 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 FAM205BPQ63HN1 556 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF787Q6DD87 383 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 SLC35D2Q76EJ3 337 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 LHFPL3Q86UP9 236 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 UEVLDQ8IX04 471 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 PM20D2Q8IYS1 436 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 OR2T4Q8NH00 348 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF420Q8TAQ5 688 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 OXGR1Q96P68 337 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 TSSK2Q96PF2 358 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 SRA1Q9HD15 236 aaKnown RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 VSX1Q9NZR4 365 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-221ENST00000641573 MOKQ9UQ07 419 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 NOX1Q9Y5S8 564 aa11.71□□□□□ -0.53
PHGDH-221ENST00000641573 CRYBG3Q68DQ2 2970 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 MED13Q9UHV7 2174 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 TMEM129A0AVI4 362 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 PRSS37A4D1T9 235 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 TTLL8A6PVC2 850 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 C12orf71A8MTZ7 269 aa11.7□□□□□ -0.54
PHGDH-221ENST00000641573 FAM171A2A8MVW0 826 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms