RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 TCF21O43680 179 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 THY1P04216 161 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 ADORA3P0DMS8 318 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 TROVE2P10155 538 aaKnown RBP eCLIP12.61□□□□□ -0.39
SRRT-219ENST00000641476 IFNGR1P15260 489 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
SRRT-219ENST00000641476 CSNK1A1P48729 337 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 DAG1Q14118 895 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 ZNF74Q16587 644 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 LINC00114Q6XXX2 140 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 RBM45Q8IUH3 476 aaKnown RBP12.61□□□□□ -0.39
SRRT-219ENST00000641476 SLC30A8Q8IWU4 369 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 ADAMTS16Q8TE57 1224 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
SRRT-219ENST00000641476 FOXN4Q96NZ1 517 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 DOK1Q99704 481 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 FOXB1Q99853 325 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 TMEM120AQ9BXJ8 343 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 RAB1BQ9H0U4 201 aa12.61□□□□□ -0.39
SRRT-219ENST00000641476 A0A0G2JND7 137 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 TMEM129A0AVI4 362 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 ZNF726A6NNF4 738 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 M0QX08 132 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 KPNA4O00629 521 aaPredicted RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 ERCC1P07992 297 aaPredicted RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 IGFBP1P08833 259 aaPredicted RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 ITGA2P17301 1181 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 PTDSS1P48651 473 aaKnown RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 CRYBA2P53672 197 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 BIDP55957 195 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 MELKQ14680 651 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 MSMPQ1L6U9 139 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 IQCCQ4KMZ1 466 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 PATL1Q86TB9 770 aaKnown RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 SNX32Q86XE0 403 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
SRRT-219ENST00000641476 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 TSPEARQ8WU66 669 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 ZNF75AQ96N20 296 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 SIKE1Q9BRV8 207 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 PCDHAC1Q9H158 963 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 SLC7A7Q9UM01 511 aa12.6□□□□□ -0.39
SRRT-219ENST00000641476 TRAPPC13A5PLN9 417 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 SHOX2O60902 331 aaPredicted RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 UBL3O95164 117 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 OR6A2O95222 327 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 STAMBPO95630 424 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 RAB36O95755 333 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 CH25HO95992 272 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 DAOP14920 347 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 ZNF23P17027 643 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 NR4A1P22736 598 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 GIPRP48546 466 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 ARFIP2P53365 341 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 PIGFQ07326 219 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 TTC33Q6PID6 262 aaPredicted RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 SLC35D2Q76EJ3 337 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 RFLNBQ8N5W9 214 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 TMEM54Q969K7 222 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 MRPL24Q96A35 216 aaKnown RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 ELAC2Q9BQ52 826 aaKnown RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 MRPL37Q9BZE1 423 aaKnown RBP12.59□□□□□ -0.39
SRRT-219ENST00000641476 TPK1Q9H3S4 243 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 NANSQ9NR45 359 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 CMAHPQ9Y471 501 aa12.59□□□□□ -0.39
SRRT-219ENST00000641476 SH3PXD2BA1X283 911 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 VSTM5A8MXK1 200 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 FXYD1O00168 92 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 FBP2O00757 339 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 RNF13O43567 381 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 TGFAP01135 160 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 ZNF35P13682 527 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 GIFP27352 417 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 GZMMP51124 257 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 VMACQ2NL98 169 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 CR1LQ2VPA4 569 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 CPLX4Q7Z7G2 160 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 ZNF540Q8NDQ6 660 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 OR6X1Q8NH79 312 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 SLC26A7Q8TE54 656 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 SOX7Q9BT81 388 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 SLC19A3Q9BZV2 496 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 TAS2R5Q9NYW4 299 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 ZNF229Q9UJW7 825 aa12.58□□□□□ -0.4
SRRT-219ENST00000641476 LRP5LA4QPB2 252 aa12.57□□□□□ -0.4
SRRT-219ENST00000641476 M0R233 179 aa12.57□□□□□ -0.4
SRRT-219ENST00000641476 ADRA2AP08913 450 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms