RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 CLDN14O95500 239 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SERPINA5P05154 406 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 UBCP0CG48 685 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TRHRP34981 398 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 RPS5P46782 204 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 RAB5CP51148 216 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ACTG2P63267 376 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CSNK1G2P78368 415 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF45Q02386 682 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 LTB4RQ15722 352 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CYP1B1Q16678 543 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ADGRD1Q6QNK2 874 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 B3GNT9Q6UX72 402 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ASRGL1Q7L266 308 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 BHLHA15Q7RTS1 189 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 P2RY8Q86VZ1 359 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 OR5D14Q8NGL3 314 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 GPR150Q8NGU9 434 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CDS1Q92903 461 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CGREF1Q99674 301 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM109Q9BVC6 243 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PECRQ9BY49 303 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 RAB18Q9NP72 206 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 DUSP22Q9NRW4 184 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PCDHGA7Q9Y5G6 932 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 DOCK5Q9H7D0 1870 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A31A6NKX4 558 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TNFSF11O14788 317 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CBX6O95503 412 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PRKACBP22694 351 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SSTR4P31391 388 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 KIR2DL1P43626 348 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CYBRD1Q53TN4 286 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 AKR1C8PQ5T2L2 129 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ASCL5Q7RTU5 278 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ADGRF3Q8IZF5 1079 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TEX26Q8N6G2 289 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CRYGNQ8WXF5 182 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 GGHQ92820 318 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 COL11A1P12107 1806 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 IGLV3-10A0A075B6K4 115 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 HMGN2P05204 90 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ZDHHC11BP0C7U3 371 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 F2RP25116 425 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 C21orf33P30042 268 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 GGT5P36269 586 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PPICP45877 212 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PNLIPRP2P54317 469 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TSTQ16762 297 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 METTL11BQ5VVY1 283 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CD276Q5ZPR3 534 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 COQ8AQ8NI60 647 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SAP25Q8TEE9 199 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 COQ10AQ96MF6 247 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 NODALQ96S42 347 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CD320Q9NPF0 282 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PITPNC1Q9UKF7 332 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 RNF150Q9ULK6 438 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 HIVEP2P31629 2446 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TRAV36DV7A0A075B6V5 113 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 FADS1O60427 444 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 DIRAS1O95057 198 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 FAM157BP0CG42 384 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 VAMP1P23763 118 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CORO7P57737 925 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 S100A10P60903 97 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 NKG7Q16617 165 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF782Q6ZMW2 699 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PRSS42Q7Z5A4 293 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM139Q8IV31 216 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 WDTC1Q8N5D0 677 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 DIRAS2Q96HU8 199 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 MRGPRX4Q96LA9 322 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 YTHDF1Q9BYJ9 559 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 WDR54Q9H977 334 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 C1RLQ9NZP8 487 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 UBQLN2Q9UHD9 624 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 AMMECR1Q9Y4X0 333 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PCDHA9Q9Y5H5 950 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 A0A1B0GTH9 108 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ADAM10O14672 748 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CYC1P08574 325 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CSF3P09919 207 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PTAFRP25105 342 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CTSSP25774 331 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 UBE2G2P60604 165 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 REEP5Q00765 189 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SNTB2Q13425 540 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 H1FNTQ75WM6 255 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 DNAJC22Q8N4W6 341 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 MITD1Q8WV92 249 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 IL1F10Q8WWZ1 152 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SLAMF9Q96A28 289 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 RSRP1Q9BUV0 290 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ATG5Q9H1Y0 275 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 OR51E2Q9H255 320 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF768Q9H5H4 540 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CHD8Q9HCK8 2581 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms