RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PTPRBP23467 1997 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 LTBP3Q9NS15 1303 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ALPK3Q96L96 1907 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TRAV39A0A0B4J263 110 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 A0A1W2PR80 420 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GNG7O60262 68 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SLCO2B1O94956 709 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SDC1P18827 310 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TM4SF1P30408 202 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PBX3P40426 434 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SOX2P48431 317 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PLP1P60201 277 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PAX5Q02548 391 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 IRF3Q14653 427 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PYDC2Q56P42 97 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM236Q5W0B7 351 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PAMR1Q6UXH9 720 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM156Q8N614 296 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PIGBQ92521 554 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CXorf40BQ96DE9 158 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MRPS24Q96EL2 167 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RSG1Q9BU20 258 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ZBP1Q9H171 429 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GBF1Q92538 1859 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MYOFQ9NZM1 2061 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 KLK8O60259 260 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 EFEMP2O95967 443 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 AGAP20933 346 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RPL7AP62424 266 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM241Q24JQ0 296 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 FBXW12Q6X9E4 464 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GOLGA7Q7Z5G4 137 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 LINC01551Q86U37 167 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SIRT2Q8IXJ6 389 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 OR52B6Q8NGF0 335 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ARRDC2Q8TBH0 407 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 OR8D1Q8WZ84 308 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GGHQ92820 318 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MCHR2Q969V1 340 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 DIRAS2Q96HU8 199 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CRISPLD1Q9H336 500 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 NECAP2Q9NVZ3 263 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 FBXL17Q9UF56 701 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 POMT2Q9UKY4 750 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PI4KAP42356 2102 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 A0A1W2PQU0 124 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CLIC3O95833 236 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MBPP02686 304 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ST6GAL1P15907 406 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 HOXB6P17509 224 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SDC2P34741 201 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GRM5P41594 1212 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RAP2BP61225 183 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 H3F3AP84243 136 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SHC2P98077 582 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 HERPUD1Q15011 391 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 C17orf99Q6UX52 265 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MARCH1Q8TCQ1 289 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 WDR89Q96FK6 387 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 OR51J1Q9H342 316 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SRMSQ9H3Y6 488 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 FZD8Q9H461 694 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ZBTB20Q9HC78 741 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ERVK13-1Q9NX77 482 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SLC9A2Q9UBY0 812 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CNTNAP4Q9C0A0 1308 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 NKX2-6A6NCS4 301 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 NPIPB15A6NHN6 443 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PMP2P02689 132 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RAP2AP10114 183 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 KLRC1P26715 233 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MRPS34P82930 218 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MESTQ5EB52 335 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 LRRC73Q5JTD7 316 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SLC22A10Q63ZE4 541 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 GRHL2Q6ISB3 625 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RHBDF2Q6PJF5 856 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SIRT6Q8N6T7 355 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SPPL2BQ8TCT7 592 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SMAP2Q8WU79 429 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 XAGE5Q8WWM1 108 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 NEIL1Q96FI4 390 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CNTNAP3BQ96NU0 1288 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MESP1Q9BRJ9 268 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ARL6Q9H0F7 186 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PLEKHA2Q9HB19 425 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM27Q9HBJ8 222 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MRPL16Q9NX20 251 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF629Q9UEG4 869 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RAP2CQ9Y3L5 183 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMED3Q9Y3Q3 217 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 FREM3P0C091 2139 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RGPD8O14715 1765 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RGPD5Q99666 1765 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ROBO2Q9HCK4 1378 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TBC1D3EA0A087X179 549 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM200CA6NKL6 621 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ENTPD6O75354 484 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 WNT11O96014 354 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms