RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SRA1Q9HD15 236 aaKnown RBP18.28■□□□□ 0.52
SYNGAP1-227ENST00000638142 CLDN4O14493 209 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 SUSD5O60279 629 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 MAS1P04201 325 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 HIST1H2ABP04908 130 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 CFPP27918 469 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 ADH7P40394 386 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 PRTGQ2VWP7 1150 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 B3GNTL1Q67FW5 361 aaPredicted RBP18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 ANKRD16Q6P6B7 361 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 Q6ZSR6 202 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 HIST3H2AQ7L7L0 130 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 SFTPA2Q8IWL1 248 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 ZNF676Q8N7Q3 588 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 ADAMTS18Q8TE60 1221 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 HIST1H2ACQ93077 130 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 TMEM106AQ96A25 262 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 MRGPRX1Q96LB2 322 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 WDR76Q9H967 626 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 GRHPRQ9UBQ7 328 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 OPN4Q9UHM6 478 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 LRP4O75096 1905 aa18.27■□□□□ 0.52
SYNGAP1-227ENST00000638142 KRBOX1C9JBD0 128 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 DCTN6O00399 190 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 RGS11O94810 467 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 NMBP08949 121 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 VSIG10L2P0DP72 767 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 CALCRP30988 508 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 S100A11P31949 105 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 RASGEF1BQ0VAM2 473 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 CSRP2Q16527 193 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 FNDC7Q5VTL7 733 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 ARMC6Q6NXE6 501 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 NHLRC1Q6VVB1 395 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 ESX1Q8N693 406 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR4C16Q8NGL9 310 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 OIT3Q8WWZ8 545 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 THRSPQ92748 146 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 TOE1Q96GM8 510 aaKnown RBP18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 GINS4Q9BRT9 223 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 CLDN16Q9Y5I7 305 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 TMEM14AQ9Y6G1 99 aa18.27■□□□□ 0.51
SYNGAP1-227ENST00000638142 NUP210LQ5VU65 1888 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 GGT3PA6NGU5 568 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 TUSC1Q2TAM9 212 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 ARSKQ6UWY0 536 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 MCATQ8IVS2 390 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR52B4Q8NGK2 314 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR6M1Q8NGM8 313 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 LPAR4Q99677 370 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 IGFLR1Q9H665 355 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 TP53BP1Q12888 1972 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 TVP23AA6NH52 213 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 RP2O75695 350 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 F13BP05160 661 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 ALOX5APP20292 161 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 HLXQ14774 488 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 ZNF761Q86XN6 746 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 ZNF615Q8N8J6 731 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 C19orf47Q8N9M1 422 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 GATSQ8NAP1 163 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 ZBTB44Q8NCP5 570 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR6N1Q8NGY5 312 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR6N2Q8NGY6 317 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 C1QTNF6Q9BXI9 259 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 EXOSC3Q9NQT5 275 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 PRODH2Q9UF12 536 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 GLS2Q9UI32 602 aa18.26■□□□□ 0.51
SYNGAP1-227ENST00000638142 A0A1B0GTH9 108 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 A8MXK9 166 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 PHYHO14832 338 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 BTG2P78543 158 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 PLA2G7Q13093 441 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 SKP2Q13309 424 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 MESTQ5EB52 335 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 ST8SIA4Q92187 359 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 MCHR2Q969V1 340 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 DPYSL5Q9BPU6 564 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 UBQLN4Q9NRR5 601 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 CTAG2O75638 210 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 AKR7A3O95154 331 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 RENP00797 406 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 HPGDP15428 266 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 CCR4P51679 360 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 EGR4Q05215 589 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 RPL18Q07020 188 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 BTN1A1Q13410 526 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 GRM7Q14831 915 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 CD226Q15762 336 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 NUP54Q7Z3B4 507 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 NAXDQ8IW45 347 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 SCARB1Q8WTV0 552 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 ZDHHC1Q8WTX9 485 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 WDR89Q96FK6 387 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 TSPAN32Q96QS1 320 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 OR1F2PQ96R84 312 aa18.25■□□□□ 0.51
SYNGAP1-227ENST00000638142 TCEAL2Q9H3H9 227 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms