RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TTLL10Q6ZVT0 673 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 SLC35F3Q8IY50 421 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 BOLLQ8N9W6 283 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 TAAR8Q969N4 342 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 ELSPBP1Q96BH3 223 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 FBXL21Q9UKT6 434 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 UPK3AO75631 287 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 MPZL1O95297 269 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 CD14P08571 375 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 VSIG10L2P0DP72 767 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 MYF5P13349 255 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 GABRG2P18507 467 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 GPR3P46089 330 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 HYAL1Q12794 435 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 OR7E24Q6IFN5 339 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 DND1Q8IYX4 353 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 THAP3Q8WTV1 239 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 TOE1Q96GM8 510 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 GOSR2O14653 212 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 PRAMEF2O60811 474 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 WNT11O96014 354 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 SPARCP09486 303 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 GTF2F2P13984 249 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ZP2Q05996 745 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 DYRK1AQ13627 763 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF74Q16587 644 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 AANATQ16613 207 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 COL28A1Q2UY09 1125 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 DCAF12L2Q5VW00 463 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF627Q7L945 461 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 CGGBP1Q9UFW8 167 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MAB21L2Q9Y586 359 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 WDFY4Q6ZS81 3184 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 TCRBV16S1A1N1A0A5B0 115 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 PDCD5O14737 125 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 CREBL2O60519 120 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF35P13682 527 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ARHGDIBP52566 201 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 GLRX5Q86SX6 157 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 BIVMQ86UB2 503 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 OR4C16Q8NGL9 310 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 OR2G2Q8NGZ5 317 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 TNFAIP8L1Q8WVP5 186 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 OR11A1Q9GZK7 315 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 ARL6Q9H0F7 186 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MMP25Q9NPA2 562 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 MRPS33Q9Y291 106 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-228ENST00000636610 M0QYG6 137 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 CD3DP04234 171 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 HIST1H2ABP04908 130 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 UBL4AP11441 157 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 C4orf46Q504U0 113 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 METTL11BQ5VVY1 283 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 HIST3H2AQ7L7L0 130 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 GRAMD2AQ8IUY3 354 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 PRSS35Q8N3Z0 413 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 HIST1H2ACQ93077 130 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ELOVL3Q9HB03 270 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 SCDO00767 359 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ICOSLGO75144 302 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 OPN1LWP04000 364 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ATF4P18848 351 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 POU3F4P49335 361 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 H2BFSP57053 126 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 BIKQ13323 160 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ATXN7L3Q14CW9 347 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF141Q15928 474 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 BEX5Q5H9J7 111 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 UNQ9370/PRO34162Q6UXP9 181 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 GPR119Q8TDV5 335 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ACTR6Q9GZN1 396 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 RBBP9O75884 186 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 SPDEFO95238 335 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ITGA5P08648 1049 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms