RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SYPL1Q16563 259 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 OR4A15Q8NGL6 344 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 MRAPQ8TCY5 172 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 DIRC2Q96SL1 478 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 FOXB1Q99853 325 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 MECRQ9BV79 373 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 GATA5Q9BWX5 397 aaPredicted RBP15.27■□□□□ 0.04
CLN6-212ENST00000636020 DPY30Q9C005 99 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 MARCH7Q9H992 704 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 PLXNB1O43157 2135 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 TMEM233B4DJY2 109 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 ERLIN1O75477 346 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 FGF4P08620 206 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 CCL2P13500 99 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 LOXL3P58215 753 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 COPZ1P61923 177 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 C2orf68Q2NKX9 166 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 XKR7Q5GH72 579 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 C6orf136Q5SQH8 315 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 ATG16L1Q676U5 607 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 LRRC74BQ6ZQY2 392 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 SKA3Q8IX90 412 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 EMC6Q9BV81 110 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 B3GAT2Q9NPZ5 323 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 KLHL21Q9UJP4 597 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 GPR45Q9Y5Y3 372 aa15.26■□□□□ 0.03
CLN6-212ENST00000636020 TANC2Q9HCD6 1990 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 TRAV40A0A0B4J280 105 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 CDHR4A6H8M9 788 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 F5H0A9 414 aaPredicted RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 AIM2O14862 343 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 SPRY3O43610 288 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 PLIN3O60664 434 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 DBIP07108 87 aaKnown RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 DRD4P21917 467 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 MMP15P51511 669 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 UCP2P55851 309 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 PAX2Q02962 417 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 HNRNPA0Q13151 305 aaKnown RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 Q6YL49 198 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 KLHL36Q8N4N3 616 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 SPICQ8N5J4 248 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 TMEM86BQ8N661 226 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 CPEB3Q8NE35 698 aaKnown RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 PNPT1Q8TCS8 783 aaKnown RBP15.25■□□□□ 0.03
CLN6-212ENST00000636020 NEURL3Q96EH8 262 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 TSPYL1Q9H0U9 437 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 CDH20Q9HBT6 801 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 NOX4Q9NPH5 578 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 TCF7L2Q9NQB0 619 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 NOTCH3Q9UM47 2321 aa15.25■□□□□ 0.03
CLN6-212ENST00000636020 M0R082 166 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 GLRA3O75311 464 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 C1QCP02747 245 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 PRG2P13727 222 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 HLA-DOBP13765 273 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 CPA3P15088 417 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 RPL15P61313 204 aaKnown RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 TMEM155Q4W5P6 130 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 SPRNQ5BIV9 151 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 NHLRC1Q6VVB1 395 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 H1FNTQ75WM6 255 aaPredicted RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 SNX32Q86XE0 403 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 HOMEZQ8IX15 550 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 FNDC5Q8NAU1 212 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 OR10S1Q8NGN2 331 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 ZNF417Q8TAU3 575 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 MZB1Q8WU39 189 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 C3orf30Q96M34 536 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 DCLRE1CQ96SD1 692 aaKnown RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 ZNF587Q96SQ5 575 aaPredicted RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 ULBP2Q9BZM5 246 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 BCL2L14Q9BZR8 327 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 EGLN1Q9GZT9 426 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 MARCOQ9UEW3 520 aaPredicted RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 OR5V1Q9UGF6 321 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 IL20RAQ9UHF4 553 aa15.24■□□□□ 0.03
CLN6-212ENST00000636020 EPPK1P58107 5090 aaKnown RBP15.24■□□□□ 0.03
CLN6-212ENST00000636020 DOCK11Q5JSL3 2073 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 MS4A18H0YCH9 400 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 MFN2O95140 757 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 CPSF4O95639 269 aaKnown RBP15.23■□□□□ 0.03
CLN6-212ENST00000636020 SNAP29O95721 258 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 ADH4P08319 380 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 CSF1P09603 554 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 MYZAPP0CAP1 466 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 G6PDP11413 515 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 ARRB2P32121 409 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 CLDN8P56748 225 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 PMS2P3Q13401 168 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 MS4A18Q3C1V0 323 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 ESCO2Q56NI9 601 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 TMEM255AQ5JRV8 349 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 BRD3OSQ6XYD6 125 aa15.23■□□□□ 0.03
CLN6-212ENST00000636020 ZNF620Q6ZNG0 422 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms