RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 POLD4Q9HCU8 107 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 SLC52A3Q9NQ40 469 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 NANSQ9NR45 359 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 SLC2A9Q9NRM0 540 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 CUTCQ9NTM9 273 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 NLE1Q9NVX2 485 aaPredicted RBP2.57□□□□□ -2
PSPC1-208ENST00000635562 TREM2Q9NZC2 230 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 PTTG2Q9NZH5 202 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 PAK5Q9P286 719 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 NPIPA1Q9UND3 350 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 TFR2Q9UP52 801 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 PAM16Q9Y3D7 125 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 STYXL1Q9Y6J8 313 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 TRIP12Q14669 1992 aaPredicted RBP2.57□□□□□ -2
PSPC1-208ENST00000635562 C9orf84Q5VXU9 1444 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 POGZQ7Z3K3 1410 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 ERBINQ96RT1 1412 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 SNAPC4Q5SXM2 1469 aa2.57□□□□□ -2
PSPC1-208ENST00000635562 BAZ1BQ9UIG0 1483 aaKnown RBP2.57□□□□□ -2
PSPC1-208ENST00000635562 KIF1BO60333 1816 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TEX13DA0A0J9YY54 714 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 hCG_38984A0A1B0GV85 526 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ATP6AP2A0A1C7CYW4 349 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CCDC182A6NF36 153 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 METTL15A6NJ78 407 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SLC22A20A6NK97 555 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HIDE1A8MVS5 230 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 LMO7DNF2Z398 122 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 H0YL77 283 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 KPNA3O00505 521 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 CASKO14936 926 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TCAPO15273 167 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 INPP4BO15327 924 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SLC16A5O15375 505 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ARPC5O15511 151 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF749O43361 778 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SNX3O60493 162 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SRPX2O60687 465 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 EIF1BO60739 113 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 SERPINB7O75635 380 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 GRAP2O75791 330 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 AQP8O94778 261 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 EML2O95834 649 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TIMP1P01033 207 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 IFNA21P01568 189 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 P04436 131 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CD5P06127 495 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 LINC00271P0C7V0 271 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HAPLN1P10915 354 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 SCGB1A1P11684 91 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ANXA3P12429 323 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 GTF2F2P13984 249 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 DAOP14920 347 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HIST1H1CP16403 213 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 AOC1P19801 751 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ELK4P28324 431 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 EPHA2P29317 976 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HPCAL1P37235 193 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 EIF1P41567 113 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 BRCC3P46736 316 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HCAR3P49019 387 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CX3CR1P49238 355 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TAS2R38P59533 333 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RPL19P84098 196 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 EWSR1Q01844 656 aaKnown RBP eCLIP2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF45Q02386 682 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OC90Q02509 493 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 ST3GAL3Q11203 375 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 PNRC1Q12796 327 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF155Q12901 538 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 KLRB1Q12918 225 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 MAD2L1Q13257 205 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 UBE2V1Q13404 147 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RAB31Q13636 194 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 POU6F1Q14863 301 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF74Q16587 644 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HAGHQ16775 308 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 DGUOKQ16854 277 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 WHAMMP3Q1A5X7 153 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RPEL1Q2QD12 228 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 PGGHGQ32M88 737 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RFX4Q33E94 735 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SNAI3Q3KNW1 292 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RFTN2Q52LD8 501 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 KLHL12Q53G59 568 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 C1orf220Q5T0J3 134 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 LPCAT4Q643R3 524 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SAXO2Q658L1 398 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ELP2Q6IA86 826 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 FAM45BPQ6NSW5 357 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CDC42EP5Q6NZY7 148 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZFP1Q6P2D0 407 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 DHRS4L2Q6PKH6 230 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 PAQR6Q6TCH4 344 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TMEM184AQ6ZMB5 413 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CYHR1Q6ZMK1 362 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 C19orf35Q6ZS72 473 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 Q6ZTC4 211 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TMEM179Q6ZVK1 233 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 Q75L30 129 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms