RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 LYPD3O95274 346 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 SUMO3P55854 103 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CBX3Q13185 183 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 NXNL2Q5VZ03 156 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 INO80CQ6PI98 192 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC25A43Q8WUT9 341 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 HAS2Q92819 552 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 TP53BP1Q12888 1972 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 FIGNL2A6NMB9 653 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 SRD5A2P31213 254 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CLDN15P56746 228 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 CLRN1P58418 232 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 FXYD6P3P58550 94 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 POU3F1Q03052 451 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 PLBD1Q6P4A8 553 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR4Q3Q8NH05 313 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 PAQR8Q8TEZ7 354 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 KLHL15Q96M94 604 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 TRIB1Q96RU8 372 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 TIMP4Q99727 224 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 TTTY12Q9BZ98 90 aa11.24□□□□□ -0.61
SYNGAP1-207ENST00000628646 A0A087WZY1 265 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM8BA6NDV4 472 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 J3QRE1 110 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 OIP5O43482 229 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ENPP1P22413 925 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 PTGS2P35354 604 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF136P52737 540 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ALG10Q5BKT4 473 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 VASNQ6EMK4 673 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZBTB8AQ96BR9 441 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 CALHM2Q9HA72 323 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ISYNA1Q9NPH2 558 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 B3GAT2Q9NPZ5 323 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 KLHL13Q9P2N7 655 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 C17orf51A8MQB3 221 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 AKR7A3O95154 331 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 F13BP05160 661 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 RPS4Y1P22090 263 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 CFL1P23528 166 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC35A1P78382 337 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 MEPCEQ7L2J0 689 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 MS4A15Q8N5U1 240 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 KCNE5Q9UJ90 142 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TNFSF11O14788 317 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 LALBAP00709 142 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 GRPRP30550 384 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TNFSF8P32971 234 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 MAP3K8P41279 467 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 KLHL26Q53HC5 615 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF57Q68EA5 555 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 FAM109AQ8N4B1 249 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC35B4Q969S0 331 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 WDFY2Q96P53 400 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 PRSS27Q9BQR3 290 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 SMURF1Q9HCE7 757 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 PLEKHB1Q9UF11 243 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM129A0AVI4 362 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 SNPHO15079 494 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 HTR1FP30939 366 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TNFSF10P50591 281 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ACTA2P62736 377 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ACTG2P63267 376 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 C3AR1Q16581 482 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZMAT1Q5H9K5 638 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARL9Q6T311 187 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 IGF2-ASQ6U949 168 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 APOOLQ6UXV4 268 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 GPR137CQ8N3F9 429 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM251Q8N6I4 163 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 HAVCR2Q8TDQ0 301 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 DCLRE1CQ96SD1 692 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 TBX5Q99593 518 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
SYNGAP1-207ENST00000628646 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 J3QLW9 94 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 PDCD5O14737 125 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 EEF1E1O43324 174 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 DKK1O94907 266 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF19P17023 458 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 EFNA3P52797 238 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 SYT14Q8NB59 555 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR13C2Q8NGS9 318 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 THRSPQ92748 146 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms