RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR9Q1Q8NGQ5 310 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 COG8Q96MW5 612 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 AGAP4Q96P64 663 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TEAD3Q99594 435 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 HES7Q9BYE0 225 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TMEM185BQ9H7F4 350 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 INIPQ9NRY2 104 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CENPEQ02224 2701 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF814B7Z6K7 855 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 DCTN6O00399 190 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ATE1O95260 518 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 HLA-DOBP13765 273 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 KLK2P20151 261 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 GSTT1P30711 240 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 TMBIM6P55061 237 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 PUDPQ08623 228 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 KRR1Q13601 381 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 C1DQ13901 141 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 OR1C1Q15619 314 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 CTF1Q16619 201 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 RPUSD3Q6P087 351 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 LEG1Q6P5S2 330 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 H1FNTQ75WM6 255 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 GHDCQ8N2G8 530 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 PROKR2Q8NFJ6 384 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 OR51G2Q8NGK0 314 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF519Q8TB69 540 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 RAB2BQ8WUD1 216 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 C12orf43Q96C57 262 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 NMD3Q96D46 503 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 OR5B2Q96R09 309 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 PIGQQ9BRB3 760 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ASB6Q9NWX5 421 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ALKBH4Q9NXW9 302 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 PLA2G3Q9NZ20 509 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 TNFRSF10DQ9UBN6 386 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF346Q9UL40 294 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 BOKQ9UMX3 212 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 EXOSC1Q9Y3B2 195 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 HDGFL3Q9Y3E1 203 aa8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-223ENST00000627587 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2M5A3KFT3 312 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 XKRYO14609 159 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 LRRTM2O43300 516 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 PLGP00747 810 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 IGHMP01871 453 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 HSMCR30P0CW71 290 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SFTPDP35247 375 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RPL27P61353 136 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ZP4Q12836 540 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 POU4F2Q12837 409 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 AQP6Q13520 282 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF169Q14929 603 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TMEM176BQ3YBM2 270 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 LINC01590Q5TEZ4 76 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 LCN1P1Q5VSP4 162 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SP5Q6BEB4 398 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ANKRD13BQ86YJ7 626 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 KDM8Q8N371 416 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 MDS2Q8NDY4 140 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OR51L1Q8NGJ5 315 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SMAP2Q8WU79 429 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OPALINQ96PE5 141 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TSSK2Q96PF2 358 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 FAM173AQ9BQD7 235 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 JAM3Q9BX67 310 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RACGAP1Q9H0H5 632 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ADGRL4Q9HBW9 690 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 CHST11Q9NPF2 352 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 FANCFQ9NPI8 374 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 HAO2Q9NYQ3 351 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 B3GAT1Q9P2W7 334 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ENPP5Q9UJA9 477 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 B3GALT5Q9Y2C3 310 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 A0A1W2PRG6 482 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TMEM129A0AVI4 362 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OR5H15A6NDH6 313 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 H7C1C5 153 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RAMP1O60894 148 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 AKR7A3O95154 331 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 GABARAPO95166 117 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RENP00797 406 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TFP02787 698 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SPI1P17947 270 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 NR4A1P22736 598 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 GDF1P27539 372 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 LCN6P62502 163 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RUNX1T1Q06455 604 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 PON3Q15166 354 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SPHARQ15513 63 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SSX1Q16384 188 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ACKR1Q16570 336 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC35D3Q5M8T2 416 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2G6Q5TZ20 316 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ADCK1Q86TW2 530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms