RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SIAH3Q8IW03 269 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 OR2T33Q8NG76 320 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 OR4E2Q8NGC2 313 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 FAM122AQ96E09 287 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 CLCC1Q96S66 551 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 TBX5Q99593 518 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 TMEM208Q9BTX3 173 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 RAB11FIP5Q9BXF6 653 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
LITAF-221ENST00000622633 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
LITAF-221ENST00000622633 MUC22E2RYF6 1773 aaPredicted RBP11.38□□□□□ -0.59
LITAF-221ENST00000622633 SCN3AQ9NY46 2000 aa11.38□□□□□ -0.59
LITAF-221ENST00000622633 GPR89AB7ZAQ6 455 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 IMPA2O14732 288 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 DNAJB6O75190 326 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 PTBP3O95758 552 aaKnown RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 GPR89BP0CG08 455 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 NDUFV2P19404 249 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 CMPK1P30085 196 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 BDKRB2P30411 391 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 PMELP40967 661 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 RBX1P62877 108 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 GFOD2Q3B7J2 385 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 TANGO2Q6ICL3 276 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MFSD12Q6NUT3 480 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 CXXC5Q7LFL8 322 aaKnown RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 CDK20Q8IZL9 346 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ST7LQ8TDW4 575 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MAFIPQ8WZ33 124 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 RAB24Q969Q5 203 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 TIMM29Q9BSF4 260 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ALG8Q9BVK2 526 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 UBQLN3Q9H347 655 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 PTGFRNQ9P2B2 879 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 FLVCR2Q9UPI3 526 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 SNRNP200O75643 2136 aaKnown RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 A0A1B0GVC2 190 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 LINC01553A4QN01 128 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 A6NIN4 97 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 CHST10O43529 356 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MYOGP15173 224 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 IFNGR1P15260 489 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ACHEP22303 614 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MAT2AP31153 395 aaKnown RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 GJA4P35212 333 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 CEBPEQ15744 281 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 TMEM71Q6P5X7 295 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 SMARCD3Q6STE5 483 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 ZNF836Q6ZNA1 936 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 GPR137CQ8N3F9 429 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 FOXRED1Q96CU9 486 aaPredicted RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 ABHD1Q96SE0 405 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 FXYD6Q9H0Q3 95 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 C20orf85Q9H1P6 137 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MTHFD2LQ9H903 347 aaPredicted RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 ACKR4Q9NPB9 350 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 CYSLTR2Q9NS75 346 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 MED17Q9NVC6 651 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 WDR45Q9Y484 360 aa11.37□□□□□ -0.59
LITAF-221ENST00000622633 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
LITAF-221ENST00000622633 PRR23D1E9PI22 279 aaPredicted RBP11.36□□□□□ -0.59
LITAF-221ENST00000622633 CIDEAO60543 219 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 ACTL6AO96019 429 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 ZGLP1P0C6A0 271 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 PRR23D2P0DMB1 279 aaPredicted RBP11.36□□□□□ -0.59
LITAF-221ENST00000622633 SLC2A1P11166 492 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 GALNSP34059 522 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
LITAF-221ENST00000622633 CXADRP78310 365 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 ACSM1Q08AH1 577 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 RSU1Q15404 277 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 DUSP5Q16690 384 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 NR2C2APQ86WQ0 139 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 TMEM99Q8N816 258 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 ARSGQ96EG1 525 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 DPH1Q9BZG8 443 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 CACYBPQ9HB71 228 aaKnown RBP11.36□□□□□ -0.59
LITAF-221ENST00000622633 ASB6Q9NWX5 421 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 H7C1Q1 480 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 RNF13O43567 381 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 FMO6PO60774 539 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 EML2O95834 649 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 MT-ND4LP03901 98 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 GKN3PP0CG01 181 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 AVPR2P30518 371 aa11.36□□□□□ -0.59
LITAF-221ENST00000622633 CDX1P47902 265 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms