RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NUDT6P53370 316 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC16A1P53985 500 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 RUNX1T1Q06455 604 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 GFRALQ6UXV0 394 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 P4HA3Q7Z4N8 544 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 WDFY1Q8IWB7 410 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 OR9Q1Q8NGQ5 310 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 HCAR1Q9BXC0 346 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 RPRD1BQ9NQG5 326 aaKnown RBP15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 CLCF1Q9UBD9 225 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 PRSS37A4D1T9 235 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 KDM4EB2RXH2 506 aaPredicted RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 H3BSA7 217 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC1A7O00341 560 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 TRMUO75648 421 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 TGM6O95932 706 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 JUNBP17275 347 aaPredicted RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 DBPQ10586 325 aaPredicted RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 CAMK2DQ13557 499 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 RNPS1Q15287 305 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 AADACL4Q5VUY2 407 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 NXNL2Q5VZ03 156 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 CARD17Q5XLA6 110 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF773Q6PK81 442 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 ADGRE4PQ86SQ3 457 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 ZIC4Q8N9L1 334 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 SYT14Q8NB59 555 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 OR6X1Q8NH79 312 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 PTP4A1Q93096 173 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 ADAD1Q96M93 576 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 DDOQ99489 341 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 AMBNQ9NP70 447 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 EMC3Q9P0I2 261 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 BSNQ9UPA5 3926 aa15.84■□□□□ 0.13
PTCHD3-202ENST00000622555 IGKV3D-15A0A087WSY6 115 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 SH3D21A4FU49 640 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 GPR171O14626 319 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 AKAP8O43823 692 aaKnown RBP15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 XPNPEP2O43895 674 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 FAM20BO75063 409 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 IGHG1P01857 330 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 SF3B4Q15427 424 aaKnown RBP eCLIP15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 ACSF3Q4G176 576 aaPredicted RBP15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 KLHL12Q53G59 568 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 GTF2IRD2BQ6EKJ0 949 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 NIPAL3Q6P499 406 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 GTF2IRD2Q86UP8 949 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 CD163Q86VB7 1156 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 GID4Q8IVV7 300 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 FAM57AQ8TBR7 257 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 ZFAND2BQ8WV99 257 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF566Q969W8 418 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC25A44Q96H78 314 aaPredicted RBP15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 SNX18Q96RF0 628 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 KCNK17Q96T54 332 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 SYT4Q9H2B2 425 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 OR51V1Q9H2C8 321 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 PTTG2Q9NZH5 202 aa15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 ING1Q9UK53 422 aaPredicted RBP15.83■□□□□ 0.13
PTCHD3-202ENST00000622555 DOCK7Q96N67 2140 aa15.83■□□□□ 0.12
PTCHD3-202ENST00000622555 ARHGAP21Q5T5U3 1957 aa15.83■□□□□ 0.12
PTCHD3-202ENST00000622555 SNTNA6NMZ2 147 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 M0R3G1 203 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 PRODHO43272 600 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 GYPBP06028 91 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CLUP10909 449 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CDH11P55287 796 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CLRN1P58418 232 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 GABARAPL2P60520 117 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CXCR4P61073 352 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 RPS7P62081 194 aaKnown RBP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 NFATC3Q12968 1075 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 LSAMPQ13449 338 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 RFKQ969G6 155 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 NMNAT2Q9BZQ4 307 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 VSX1Q9NZR4 365 aaPredicted RBP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CLEC4AQ9UMR7 237 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC22A23A1A5C7 686 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 FIGNL2A6NMB9 653 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 WDR1O75083 606 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CCDC159P0C7I6 412 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 PGA4P0DJD7 388 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 PGA3P0DJD8 388 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 GABRA1P14867 456 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC25A1P53007 311 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CSNK2BP67870 215 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 B3GNT6Q6ZMB0 384 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 AAED1Q7RTV5 226 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 TUSC5Q8IXB3 177 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 NOXO1Q8NFA2 376 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 TSSK2Q96PF2 358 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 OR2M2Q96R28 347 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 ALG12Q9BV10 488 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 MRPL13Q9BYD1 178 aaKnown RBP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 RERGLQ9H628 205 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 CALHM2Q9HA72 323 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 BCO1Q9HAY6 547 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 SRA1Q9HD15 236 aaKnown RBP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 ASB6Q9NWX5 421 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 SCN3BQ9NY72 215 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms