RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 FOXRED1Q96CU9 486 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 PIK3IP1Q96FE7 263 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF764Q96H86 408 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 TXN2Q99757 166 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 NDC1Q9BTX1 674 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CIPCQ9C0C6 399 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 FBXO44Q9H4M3 255 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 APMAPQ9HDC9 416 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 BPIFA1Q9NP55 256 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 RYDENQ9NUL5 291 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 VPS29Q9UBQ0 182 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 LPAR3Q9UBY5 353 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR14J1Q9UGF5 321 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SHPKQ9UHJ6 478 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 EXOGQ9Y2C4 368 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 PLXNB2O15031 1838 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 GON4LQ3T8J9 2241 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SMIM28A0A1B0GU29 152 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 MYADML2A6NDP7 307 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 A8MXE2 369 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 H0YIV9 168 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ERCC1P07992 297 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 SLC35G4P0C7Q5 338 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ARAFP10398 606 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 LPOP22079 712 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 MEF2DQ14814 521 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FAM110CQ1W6H9 321 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 VWA2Q5GFL6 755 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PRAMEF17Q5VTA0 474 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FAM83HQ6ZRV2 1179 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 FCRLAQ7L513 359 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 RBM45Q8IUH3 476 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 MAML2Q8IZL2 1156 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 NEK7Q8TDX7 302 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 C15orf40Q8WUR7 153 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SECTM1Q8WVN6 248 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FGF11Q92914 225 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF385AQ96PM9 386 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 KCNK17Q96T54 332 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 WRAP53Q9BUR4 548 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 SLC26A1Q9H2B4 701 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 MED17Q9NVC6 651 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ARL15Q9NXU5 204 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 NOP16Q9Y3C1 178 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 A0A087WZY1 265 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CBY3A6NI87 242 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FAM183AA6NL82 134 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 OR2C1O95371 312 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PMS2P2O95744 297 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PAX1P15863 534 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 HTR1FP30939 366 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 IL2RGP31785 369 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 GRK4P32298 578 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 DVL1P1P54792 670 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 PCBP3P57721 371 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 TAS2R43P59537 309 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 LY6G6FQ5SQ64 297 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CD300LDQ6UXZ3 194 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CERS6Q6ZMG9 384 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF765Q7L2R6 523 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PPP1R3BQ86XI6 285 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 JAGN1Q8N5M9 183 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FRMD1Q8N878 549 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SLC30A7Q8NEW0 376 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 OR1J1Q8NGS3 322 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PIGXQ8TBF5 258 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 C22orf15Q8WYQ4 148 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SHDQ96IW2 340 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 UBQLN4Q9NRR5 601 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 UPB1Q9UBR1 384 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 TRIOBPQ9H2D6 2365 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 TRAV1-2A0A0B4J238 106 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 GXYLT2A0PJZ3 443 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 MYBPHLA2RUH7 354 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ANTXRLA6NF34 631 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 J3QLW9 94 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 RNASET2O00584 256 aaKnown RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF208O43345 1280 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 FBXO24O75426 580 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CHRM4P08173 479 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 METTL15P1P0C7V9 234 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF19P17023 458 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CD34P28906 385 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PSEN2P49810 448 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ATP1B3P54709 279 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 RAC3P60763 192 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CNTN1Q12860 1018 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PRRT3Q5FWE3 981 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 DRAM2Q6UX65 266 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 CXCL17Q6UXB2 119 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 PAQR9Q6ZVX9 377 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SLC35F3Q8IY50 421 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF433Q8N7K0 673 aaPredicted RBP7.25□□□□□ -1.25
VPS11-209ENST00000622309 ZNF283Q8N7M2 679 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 OR4C16Q8NGL9 310 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 OR6N1Q8NGY5 312 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 UBTD2Q8WUN7 234 aa7.25□□□□□ -1.25
VPS11-209ENST00000622309 SLC25A38Q96DW6 304 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms