RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 ZNF570Q96NI8 536 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 MRPL13Q9BYD1 178 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 KCNJ16Q9NPI9 418 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 NPDC1Q9NQX5 325 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 STX18Q9P2W9 335 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 GRHPRQ9UBQ7 328 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 UPB1Q9UBR1 384 aa9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 FOXD3Q9UJU5 478 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-221ENST00000621093 TENM4Q6N022 2769 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 NPIPB13A6NJU9 1138 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 NPIPB4C9JG80 1138 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 MGRN1O60291 552 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 LYZL6O75951 148 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 SLC2A10O95528 541 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 TXNDC12O95881 172 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ALPLP05186 524 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ITGA5P08648 1049 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 HIST1H1CP16403 213 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 IGFBP5P24593 272 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 SDHAP31040 664 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 CDKN2AP42771 156 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 CSNK1A1P48729 337 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 RPS6KA3P51812 740 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 CRISP1P54107 249 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 CLRN1P58418 232 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ROR2Q01974 943 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 KRR1Q13601 381 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 GINS1Q14691 196 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 TAF11Q15544 211 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ZIK1Q3SY52 487 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 LRFN4Q6PJG9 635 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ZBTB49Q6ZSB9 765 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 Q6ZT83 130 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 BEND4Q6ZU67 534 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 GPR137CQ8N3F9 429 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 NOXO1Q8NFA2 376 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 OR52L1Q8NGH7 329 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 OR6N1Q8NGY5 312 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 OR4K13Q8NH42 304 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 TEX47Q8TBZ9 253 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 HTRA1Q92743 480 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ZNF566Q969W8 418 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 EME1Q96AY2 570 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 SLC25A44Q96H78 314 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ADAD1Q96M93 576 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 C9orf16Q9BUW7 83 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 RBM4Q9BWF3 364 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 LINC00470Q9BZP3 86 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 NDEL1Q9GZM8 345 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 FN3KQ9H479 309 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 RNPEPL1Q9HAU8 725 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 GPR35Q9HC97 309 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 USE1Q9NZ43 259 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 FLNCQ14315 2725 aa9.63□□□□□ -0.87
POLR2J3-221ENST00000621093 ARPC3O15145 178 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 KRT33AO76009 404 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 SEC14L2O76054 403 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ATP6V1G2O95670 118 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 IGHG1P01857 330 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 QDPRP09417 244 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CDH2P19022 906 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CCKARP32238 428 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CD79BP40259 229 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 GIPRP48546 466 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ALDH3A2P51648 485 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CDK5Q00535 292 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 SLC34A1Q06495 639 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CD47Q08722 323 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 HIST3H3Q16695 136 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CEACAM16Q2WEN9 425 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 FBXL19-AS1Q494R0 122 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ZNF362Q5T0B9 420 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 GPR139Q6DWJ6 353 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 RPL13AP3Q6NVV1 102 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 STAC2Q6ZMT1 411 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 PARP8Q8N3A8 854 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 LNX2Q8N448 690 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ZNF433Q8N7K0 673 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 POMGNT2Q8NAT1 580 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 SDR9C7Q8NEX9 313 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 OR52E2Q8NGJ4 325 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 NRG4Q8WWG1 115 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 DNAJC9Q8WXX5 260 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 RNASE6Q93091 150 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 MCHR2Q969V1 340 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 NMD3Q96D46 503 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 MBOAT4Q96T53 435 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ULBP2Q9BZM5 246 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 RIBC2Q9H4K1 309 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 CRLF2Q9HC73 371 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 ASB6Q9NWX5 421 aa9.62□□□□□ -0.87
POLR2J3-221ENST00000621093 GLTPQ9NZD2 209 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms