RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 A0A1W2PPQ1 181 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ABCD4O14678 606 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 LATO43561 262 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MGMTP16455 207 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 USF1P22415 310 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 CCNOP22674 350 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 CX3CR1P49238 355 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PTOV1Q86YD1 416 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PLA2G12AQ9BZM1 189 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MAGEH1Q9H213 219 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 SRMSQ9H3Y6 488 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 AQP8O94778 261 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 NFATC1O95644 943 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 MUC1P15941 1255 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ETV6P41212 452 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 FASLGP48023 281 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 NHLH2Q02577 135 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 VITQ6UXI7 678 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 DPPA3Q6W0C5 159 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 REC114Q7Z4M0 266 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SGPP2Q8IWX5 399 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 EFCAB11Q9BUY7 163 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR51M1Q9H341 326 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PISDQ9UG56 409 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 CCL16O15467 120 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SLC25A27O95847 323 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 TMIGD3P0DMS9 266 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 MEF2DQ14814 521 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 APCDD1Q8J025 514 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 DEFB119Q8N690 84 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SFXN5Q8TD22 340 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 FRMPD1Q5SYB0 1578 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 LILRB5O75023 590 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 TYRP14679 529 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 AP1S1P61966 158 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 CYCSP99999 105 aaKnown RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GLYR1Q49A26 553 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR9K2Q8NGE7 335 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR51A4Q8NGJ6 313 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR51A2Q8NGJ7 313 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PAAF1Q9BRP4 392 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GPR87Q9BY21 358 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 IL26Q9NPH9 171 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 MYH9P35579 1960 aaKnown RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 FAM221AA4D161 298 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 DRGXA6NNA5 263 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF10P21506 573 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 IRS1P35568 1242 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PRRX1P54821 245 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R38P59533 333 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 EXOSC7Q15024 291 aaKnown RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SLC36A2Q495M3 483 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 RTP2Q5QGT7 225 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 NXPE4Q6UWF7 544 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SERINC5Q86VE9 423 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR2T27Q8NH04 317 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 LKAAEAR1Q8TD35 194 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 HLA-CQ95604 372 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 BORCS7Q96B45 105 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PRRT1Q99946 306 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ZDHHC4Q9NPG8 344 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 KCNK7Q9Y2U2 307 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GAPDHSO14556 408 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 MT-ND4LP03901 98 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 CHRNA7P36544 502 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 HNRNPA3P51991 378 aaKnown RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 RICTORQ6R327 1708 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 REEP6Q96HR9 211 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 LYSMD1Q96S90 227 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R5Q9NYW4 299 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SUSD2Q9UGT4 822 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SOWAHBA6NEL2 793 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PNMTP11086 282 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ALG10Q5BKT4 473 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GJD4Q96KN9 370 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 SLC2A4RGQ9NR83 387 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 HEBP2Q9Y5Z4 205 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ACRV1P26436 265 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ABCD3P28288 659 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 VASPP50552 380 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 CTXN1P60606 82 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GLO1Q04760 184 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 GAMTQ14353 236 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 PLEKHS1Q5SXH7 462 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR4D9Q8NGE8 314 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 OR5AP2Q8NGF4 316 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM239Q8WW34 195 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ARV1Q9H2C2 271 aa4.65□□□□□ -1.67
VPS13D-214ENST00000620676 ING1Q9UK53 422 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-214ENST00000620676 A0A1B0GUH1 482 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IDSB3KWA1 339 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SLC31A1O15431 190 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ONECUT2O95948 504 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RCC1P18754 421 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IKZF1Q13422 519 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 GDF7Q7Z4P5 450 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms