RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CNIH3Q8TBE1 160 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CPT1CQ8TCG5 803 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ABHD3Q8WU67 409 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 HDAC2Q92769 488 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 TMEM45BQ96B21 275 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 INTS12Q96CB8 462 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 LRR1Q96L50 414 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF582Q96NG8 517 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF385AQ96PM9 386 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 RBP7Q96R05 134 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 NR1H4Q96RI1 486 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 TRIB1Q96RU8 372 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ALG12Q9BV10 488 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 EMC6Q9BV81 110 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 MRPL13Q9BYD1 178 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 NMNAT2Q9BZQ4 307 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 BCO1Q9HAY6 547 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 HINT3Q9NQE9 182 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 GLRX2Q9NS18 164 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PLCXD1Q9NUJ7 323 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PARPBPQ9NWS1 579 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 VSX1Q9NZR4 365 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CLCF1Q9UBD9 225 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 GPR52Q9Y2T5 361 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 FAM183AA6NL82 134 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 FIGNL2A6NMB9 653 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 SNTNA6NMZ2 147 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 PRRG2O14669 202 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 ATXN7O15265 892 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 PRODHO43272 600 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 AKAP8O43823 692 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 IGHG1P01857 330 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 ABOP16442 354 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 FMO3P31513 532 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RBPJQ06330 500 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 LGALS3BPQ08380 585 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 NFATC3Q12968 1075 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 TMED1Q13445 227 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 CAMK2DQ13557 499 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MELKQ14680 651 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 SMN1Q16637 294 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 ACSF3Q4G176 576 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RBM48Q5RL73 367 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 THEM4Q5T1C6 240 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 C1orf185Q5T7R7 199 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RTL6Q6ICC9 239 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 PLXDC2Q6UX71 529 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RPTNQ6XPR3 784 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MEPCEQ7L2J0 689 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 AAED1Q7RTV5 226 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 BCDIN3DQ7Z5W3 292 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 DOLPP1Q86YN1 238 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 WDFY1Q8IWB7 410 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MCEMP1Q8IX19 187 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 TUSC5Q8IXB3 177 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 OR6V1Q8N148 313 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 SYT14Q8NB59 555 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 SDR9C7Q8NEX9 313 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 BPIFB6Q8NFQ5 453 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 OR2T4Q8NH00 348 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 FNDC8Q8TC99 324 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RFKQ969G6 155 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 TMEM54Q969K7 222 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF566Q969W8 418 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 OTULINQ96BN8 352 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 OR2M2Q96R28 347 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 TEAD3Q99594 435 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 TM9SF2Q99805 663 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 HCAR1Q9BXC0 346 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MED20Q9H944 212 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 SRA1Q9HD15 236 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MRPS18AQ9NVS2 196 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 ASB6Q9NWX5 421 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 DNAJC27Q9NZQ0 273 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 EMC3Q9P0I2 261 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 B9D1Q9UPM9 204 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MOKQ9UQ07 419 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RCE1Q9Y256 329 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 RPL36Q9Y3U8 105 aaKnown RBP7.12□□□□□ -1.27
CPNE3-209ENST00000620393 FKBP7Q9Y680 259 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 PIEZO2Q9H5I5 2752 aa7.12□□□□□ -1.27
CPNE3-209ENST00000620393 MAP1BP46821 2468 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF407Q9C0G0 2248 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MBD3L4A6NDZ8 208 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MBD3L3A6NE82 208 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MBD3L5A6NJ08 208 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SLC19A2O60779 497 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SS18L1O75177 396 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MRPL33O75394 65 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 KHDRBS3O75525 346 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 PGA4P0DJD7 388 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 PGA3P0DJD8 388 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SPI1P17947 270 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SLC2A5P22732 501 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CRHBPP24387 322 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CRABP1P29762 137 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 HTR1FP30939 366 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms