RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 IGLV3-16A0A075B6K0 115 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 IGHV1OR21-1A0A087WYE8 117 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TRBV11-1A0A0K0K1C0 115 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 LOC110117498-PIK3R3F6TDL0 507 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CCL21O00585 134 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SIVA1O15304 175 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CHST1O43916 411 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 AIREO43918 545 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FLOT1O75955 427 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SCELO95171 688 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 LALBAP00709 142 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 KLK3P07288 261 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 STSP08842 583 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 BCKDHBP21953 392 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CXCR2P25025 360 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 STOMP27105 288 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 IL12AP29459 219 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PRDX3P30048 256 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 OTX1P32242 354 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 IFNA8P32881 189 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 BTCP35070 178 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 VHLP40337 213 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 KIR2DS2P43631 304 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SLC26A2P50443 739 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CCNHP51946 323 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 DAOAP59103 153 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RAB11AP62491 216 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TGFBR3Q03167 851 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CD47Q08722 323 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CCDC173Q0VFZ6 552 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 MAB21L1Q13394 359 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 GNMTQ14749 295 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 WDR43Q15061 677 aaKnown RBP eCLIP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RAB11BQ15907 218 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 KLHL40Q2TBA0 621 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PARP15Q460N3 678 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CCDC14Q49A88 953 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 KLF17Q5JT82 389 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SAMD4BQ5PRF9 694 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PPM1LQ5SGD2 360 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 C9orf135Q5VTT2 229 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PLCXD3Q63HM9 321 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TWF2Q6IBS0 349 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 OR52W1Q6IF63 320 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 REEP3Q6NUK4 255 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TRIM40Q6P9F5 258 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 MBOAT1Q6ZNC8 495 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FRA10AC1Q70Z53 315 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ARCQ7LC44 396 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PRSS41Q7RTY9 318 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FAM220AQ7Z4H9 259 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ZNF546Q86UE3 836 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ZNF100Q8IYN0 542 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 HSD17B11Q8NBQ5 300 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FBXL13Q8NEE6 735 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 OR52E5Q8NH55 327 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RHEBL1Q8TAI7 183 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 MARCH1Q8TCQ1 289 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SLC7A13Q8TCU3 470 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 GLYATL2Q8WU03 294 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PYROXD1Q8WU10 500 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RPUSD4Q96CM3 377 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CCDC126Q96EE4 140 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SEC22AQ96IW7 307 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ITCHQ96J02 903 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 HSFY1Q96LI6 401 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ZNF578Q96N58 590 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 SORT1Q99523 831 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TSG101Q99816 390 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RARRES2Q99969 163 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ROGDIQ9GZN7 287 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 BLZF1Q9H2G9 400 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CLSTN2Q9H4D0 955 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FBXO44Q9H4M3 255 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 NTN4Q9HB63 628 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FOLH1BQ9HBA9 442 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PATZ1Q9HBE1 687 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 LY9Q9HBG7 655 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 RETNQ9HD89 108 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 MRPS30Q9NP92 439 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 ADAP2Q9NPF8 381 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 PXMP2Q9NR77 195 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 C20orf96Q9NUD7 363 aaPredicted RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 GIN1Q9NXP7 522 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 TREM2Q9NZC2 230 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 DPM3Q9P2X0 92 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 APOBEC3BQ9UH17 382 aaKnown RBP1.62□□□□□ -2.15
TARDBP-220ENST00000618606 KIF25Q9UIL4 384 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 V9GY05 133 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 CDHR2Q9BYE9 1310 aa1.62□□□□□ -2.15
TARDBP-220ENST00000618606 FRMPD3Q5JV73 1810 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 PLEKHG2Q9H7P9 1386 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 KIF27Q86VH2 1401 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 PRSS37A4D1T9 235 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 CCDC182A6NF36 153 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 LRRIQ3A6PVS8 624 aaPredicted RBP1.61□□□□□ -2.15
TARDBP-220ENST00000618606 GABRR3A8MPY1 467 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 AIM2O14862 343 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 CLIC3O95833 236 aa1.61□□□□□ -2.15
TARDBP-220ENST00000618606 TGM6O95932 706 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms