RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SLC39A7Q92504 469 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 ABCA1O95477 2261 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 FAM183AA6NL82 134 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 ABCD3P28288 659 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF133P52736 654 aaPredicted RBP13.96□□□□□ -0.17
COL5A1-208ENST00000618395 PGGHGQ32M88 737 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 ANTXRLA6NF34 631 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 RAB27BO00194 218 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 CLDN12P56749 244 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 MZT1Q08AG7 82 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 MIDNQ504T8 468 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 NKAIN3Q8N8D7 197 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 OR52I1Q8NGK6 324 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 UBXN10Q96LJ8 280 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 MRPL13Q9BYD1 178 aaKnown RBP13.96□□□□□ -0.17
COL5A1-208ENST00000618395 B4GALT6Q9UBX8 382 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 SLC31A1O15431 190 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 KLRK1P26718 216 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 NPY4RP50391 375 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 ERVFRD-1P60508 538 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.18
COL5A1-208ENST00000618395 DSC1Q08554 894 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 MMABQ96EY8 250 aaPredicted RBP13.96□□□□□ -0.18
COL5A1-208ENST00000618395 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 OR1A2Q9Y585 309 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 NFATC1O95644 943 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 DBHP09172 617 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 ATP6V1FQ16864 119 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 PRR22Q8IZ63 422 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 UCN3Q969E3 161 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 POMT2Q9UKY4 750 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 PIK3C2BO00750 1634 aa13.96□□□□□ -0.18
COL5A1-208ENST00000618395 GYPBP06028 91 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CATSPEREQ5SY80 951 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 NBPF12Q5TAG4 269 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 ADGRE4PQ86SQ3 457 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 OR6K3Q8NGY3 331 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 GPR171O14626 319 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SHC1P29353 583 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 OTX2P32243 289 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SEMG2Q02383 582 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 HES1Q14469 280 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 OR4D1Q15615 310 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CLEC12BQ2HXU8 276 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CERS5Q8N5B7 392 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 OR52A1Q9UKL2 312 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 PAM16Q9Y3D7 125 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 ATRNO75882 1429 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 FBP1P09467 338 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 MPPED2Q15777 294 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 PLCXD3Q63HM9 321 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 KCNG3Q8TAE7 436 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 LHX4Q969G2 390 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 NKX2-4Q9H2Z4 354 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SIRT7Q9NRC8 400 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 TAS2R5Q9NYW4 299 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 BTNL2Q9UIR0 455 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 RAB22AQ9UL26 194 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 DDAH2O95865 285 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 LAMP1P11279 417 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CDKN2DP55273 166 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SIRPAP78324 504 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 KIRREL1Q96J84 757 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CSNK1G1Q9HCP0 422 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 PLAGL1Q9UM63 463 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 KIAA1217Q5T5P2 1943 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 hCG_1809904A0A1W2PP81 198 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 A0A1W2PR64 198 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 A0A1W2PRV1 198 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 PLRG1O43660 514 aaKnown RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SLC14A2Q15849 920 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 MRPL21Q7Z2W9 205 aaKnown RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 SNX11Q9Y5W9 270 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 HEXAP06865 529 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 STAG3L3P0CL85 134 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 ACKR1Q16570 336 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 MS4A13Q5J8X5 152 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 C5orf46Q6UWT4 87 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 DTD2Q96FN9 168 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 MS4A4EQ96PG1 132 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF835Q9Y2P0 537 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 FBLL1A6NHQ2 334 aaKnown RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 ARFGAP1Q8N6T3 406 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 OR4A4PQ8NGN8 299 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 KCTD13Q8WZ19 329 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 RAB24Q969Q5 203 aa13.95□□□□□ -0.18
COL5A1-208ENST00000618395 MARCH4Q9P2E8 410 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-208ENST00000618395 A0A087WV62 115 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ANKRD61A6NGH8 418 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TOX3O15405 576 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 RRASP10301 218 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ALKBH1Q13686 389 aaKnown RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 CARFQ8N187 725 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 GALNT16Q8N428 558 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OR14A16Q8NHC5 309 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 PPP1R1CQ8WVI7 109 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms