RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SH2D7A6NKC9 451 aaPredicted RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 FBXO24O75426 580 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 MT-ATP6P00846 226 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 GNB1P62873 340 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 C9orf152Q5JTZ5 239 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 H2BFWTQ7Z2G1 175 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 WWTR1Q9GZV5 400 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ZNF576Q9H609 170 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 PRAMEF25A6NGN4 478 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 SNRNP70P08621 437 aaKnown RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 C1SP09871 688 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 KCTD11Q693B1 232 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 Q6ZRG5 221 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 C11orf40Q8WZ69 217 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 HAPLN2Q9GZV7 340 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 MUTYHQ9UIF7 546 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 TMEM72A0PK05 275 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 RPL35P42766 123 aaKnown RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 TM4SF4P48230 202 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 CTSCP53634 463 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 GTF2H4Q92759 462 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 IL37Q9NZH6 218 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 NDRG3Q9UGV2 375 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 HS3ST3A1Q9Y663 406 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 GRPP07492 148 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 BMP1P13497 986 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 NAGAP17050 411 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ACSM1Q08AH1 577 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 TATDN3Q17R31 274 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 TMEM41BQ5BJD5 291 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ZNF321PQ8N8H1 164 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 GOT1L1Q8NHS2 421 aaPredicted RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 KCNE4Q8WWG9 221 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 SLC6A17Q9H1V8 727 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 H0YIV9 168 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ARNTLO00327 626 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 PPP3CBP16298 524 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 YIF1BQ5BJH7 314 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 SLC35D2Q76EJ3 337 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ARPC5LQ9BPX5 153 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ARV1Q9H2C2 271 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 SEC14L6B5MCN3 397 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 PHF1O43189 567 aaPredicted RBP10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 ESPNLQ6ZVH7 1005 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 SLC38A5Q8WUX1 472 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 HES7Q9BYE0 225 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
CCDC144B-208ENST00000618081 TMED7-TICAM2A0A0A6YYA0 188 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 MEIOCA2RUB1 952 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 H0Y8G0 127 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 FADS1O60427 444 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 C6orf15Q6UXA7 325 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 LACC1Q8IV20 430 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 OR11A1Q9GZK7 315 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 TMED7Q9Y3B3 224 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 DOK2O60496 412 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 TRBV4-1A0A0J9YWV2 114 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 HSD17B6O14756 317 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 NDUFA6P56556 154 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 GNB2P62879 340 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 DPPA2Q7Z7J5 298 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 FBXW5Q969U6 566 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 ZNF775Q96BV0 537 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 THOC3Q96J01 351 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 DNMT3BQ9UBC3 853 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 RAB22AQ9UL26 194 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 SOCS6O14544 535 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 PTGER1P34995 402 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 EDDM3AQ14507 147 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 SLC25A43Q8WUT9 341 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 IER2Q9BTL4 223 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 LOC100289279A0A1B0GTE1 492 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 SLC16A6O15403 523 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 HCRTR1O43613 425 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 TRHRP34981 398 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 SEMA3BQ13214 749 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 M1APQ8TC57 530 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 LIPHQ8WWY8 451 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 OR52A1Q9UKL2 312 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 FOXD2O60548 495 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 RAB35Q15286 201 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 CBLL1Q75N03 491 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 B3GNT8Q7Z7M8 397 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 OR2L13Q8N349 312 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 METTL4Q8N3J2 472 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 CTRCQ99895 268 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 NOX4Q9NPH5 578 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 TBCEQ15813 527 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 CMPK2Q5EBM0 449 aa10.32□□□□□ -0.76
CCDC144B-208ENST00000618081 FGF21Q9NSA1 209 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms