RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CTSOP43234 321 aaPredicted RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 CLDN12P56749 244 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 VASNQ6EMK4 673 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 C11orf87Q6NUJ2 197 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ZNF836Q6ZNA1 936 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 NECTIN4Q96NY8 510 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 UHRF2Q96PU4 802 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 WDR77Q9BQA1 342 aaPredicted RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 HINT3Q9NQE9 182 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 DUSP22Q9NRW4 184 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 B3GALT5Q9Y2C3 310 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 MRPS17Q9Y2R5 130 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 V9GYH0 126 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TRBV5-4A0A0C4DH59 114 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 IGLON5A6NGN9 336 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 LIPCP11150 499 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 SFTPDP35247 375 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 RAB38P57729 211 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ZNF239Q16600 458 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ZDHHC22Q8N966 263 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 PDFQ9HBH1 243 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 MRPS28Q9Y2Q9 187 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TRPM3Q9HCF6 1732 aaPredicted RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TK1P04183 234 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ADRA2CP18825 462 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 POLR2HP52434 150 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 HOXC5Q00444 222 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 MOGAT2Q3SYC2 334 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ANKRD34AQ69YU3 496 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ZNF595Q8IYB9 648 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 RNF175Q8N4F7 328 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TMEM99Q8N816 258 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TRAV36DV7A0A075B6V5 113 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 ZNF728P0DKX0 622 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 HOXA9P31269 272 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 SNCAP37840 140 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 CDK5Q00535 292 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 IL10RAQ13651 578 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 SSX1Q16384 188 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 SLC25A30Q5SVS4 291 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 PAQR6Q6TCH4 344 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 DPPA2Q7Z7J5 298 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 DTWD2Q8NBA8 298 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 OR1S2Q8NGQ3 325 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 C2CD4CQ8TF44 421 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 CMSS1Q9BQ75 279 aaKnown RBP9.47□□□□□ -0.89
CUL4A-212ENST00000617546 C1orf198Q9H425 327 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 LTB4R2Q9NPC1 389 aa9.47□□□□□ -0.89
CUL4A-212ENST00000617546 A0A1B0GWA3 101 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 SERINC4A6NH21 518 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 E5RGE8 158 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 PLGP00747 810 aaPredicted RBP9.46□□□□□ -0.89
CUL4A-212ENST00000617546 IGHA2P01877 340 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 FOLR1P15328 257 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 NPPBP16860 134 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 DUSP8Q13202 625 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 TMEM81Q6P7N7 255 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 BVESQ8NE79 360 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 FOXJ1Q92949 421 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 BORCS7Q96B45 105 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 PAPOLGQ9BWT3 736 aaKnown RBP9.46□□□□□ -0.89
CUL4A-212ENST00000617546 NECAP2Q9NVZ3 263 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 NSG2Q9Y328 171 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 DUSP1P28562 367 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 P2RX1P51575 399 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 IRF3Q14653 427 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 CDONQ4KMG0 1287 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.89
CUL4A-212ENST00000617546 COX15Q7KZN9 410 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 PRSS58Q8IYP2 241 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 SENP5Q96HI0 755 aaPredicted RBP9.46□□□□□ -0.89
CUL4A-212ENST00000617546 SLC22A12Q96S37 553 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 TGIF2Q9GZN2 237 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.46□□□□□ -0.896e-8■■■■■ 67.2
CUL4A-212ENST00000617546 ELF5Q9UKW6 265 aaPredicted RBP9.46□□□□□ -0.89
CUL4A-212ENST00000617546 PLEKHM1Q9Y4G2 1056 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 ADAMTS7Q9UKP4 1686 aa9.46□□□□□ -0.89
CUL4A-212ENST00000617546 FAM221BA6H8Z2 402 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 GJA1P17302 382 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 FGF7P21781 194 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 PJVKQ0ZLH3 352 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 CST6Q15828 149 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 OR52E1Q8NGJ3 308 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 OR5M8Q8NGP6 311 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 EMG1Q92979 244 aaKnown RBP9.46□□□□□ -0.9
CUL4A-212ENST00000617546 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 FAM71F1Q96KD3 344 aaPredicted RBP9.46□□□□□ -0.9
CUL4A-212ENST00000617546 LDAHQ9H6V9 325 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 SPACA1Q9HBV2 294 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 A0A1W2PPV4 95 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 M0QYG6 137 aa9.46□□□□□ -0.9
CUL4A-212ENST00000617546 UPK1AO00322 258 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms