RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 VASNQ6EMK4 673 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 LHFPL2Q6ZUX7 228 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CATSPERDQ86XM0 798 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NIPA2Q8N8Q9 360 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MRGPRX4Q96LA9 322 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TNFRSF11BO00300 401 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 KCNK2O95069 426 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SP1P08047 785 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NFYBP25208 207 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CLDN15P56746 228 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TAS2R38P59533 333 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 HYAL4Q2M3T9 481 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR4A47Q6IF82 309 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MOB3BQ86TA1 216 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR4D10Q8NGI6 311 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 AGAP11Q8TF27 550 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SLC35C1Q96A29 364 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TM4SF19Q96DZ7 209 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NUAK2Q9H093 628 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZFP64Q9NPA5 681 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NPAP1Q9NZP6 1156 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF391Q9UJN7 358 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 KIAA0100Q14667 2235 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 SERPINE3A8MV23 424 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CPEP16870 476 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MICBQ29980 383 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 KANSL1Q7Z3B3 1105 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF573Q86YE8 665 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 BEST3Q8N1M1 668 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NEIL2Q969S2 332 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SIDT1Q9NXL6 827 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 PDP2Q9P2J9 529 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 RNF6Q9Y252 685 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR6C6A6NF89 314 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MCRIP1C9JLW8 97 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 LIPFP07098 398 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SPINK2P20155 84 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CERS1P27544 350 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 LSRQ86X29 649 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 TCTE3Q8IZS6 198 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF433Q8N7K0 673 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 TERB2Q8NHR7 220 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OSTF1Q92882 214 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CRISPLD1Q9H336 500 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MALT1Q9UDY8 824 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SERGEFQ9UGK8 458 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 B3GALT1Q9Y5Z6 326 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NRASP01111 189 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 UBE2G2P60604 165 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PKP1Q13835 747 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ETFRF1Q6IPR1 90 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MARCH1Q8TCQ1 289 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TMEM230Q96A57 120 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SLC6A17Q9H1V8 727 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 WDR13Q9H1Z4 485 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 KLF2Q9Y5W3 355 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 F5H5K5 113 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MS4A18H0YCH9 400 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PRAMEF4O60810 478 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PEX11AO75192 247 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 HLA-FP30511 346 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PNLIPRP2P54317 469 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MS4A18Q3C1V0 323 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MDGA2Q7Z553 956 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 GNPDA2Q8TDQ7 276 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 AKIRIN1Q9H9L7 192 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 RRP15Q9Y3B9 282 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 EDIL3O43854 480 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MITFO75030 526 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 GNLYP22749 145 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SHC1P29353 583 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SEC61A1P61619 476 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 PRAMEF17Q5VTA0 474 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 EIF5AL1Q6IS14 154 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 CD300LGQ6UXG3 332 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR5M8Q8NGP6 311 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR13C4Q8NGS5 318 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SGMS2Q8NHU3 365 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 UFD1Q92890 307 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PRSS22Q9GZN4 317 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MED17Q9NVC6 651 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 hADV38S2A0JD32 116 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PTGESO14684 152 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NIPSNAP2O75323 286 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR8U8P0C7N1 319 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 KIR2DS2P43631 304 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MLLT10P55197 1068 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 C9orf135Q5VTT2 229 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TRMT10BQ6PF06 316 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 PCSK4Q6UW60 755 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 UXS1Q8NBZ7 420 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 FBXO34Q9NWN3 711 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 COPZ2Q9P299 210 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ADAMTS20P59510 1910 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ARPC4-TTLL3A0A0A6YYG9 625 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 LRRC3CA6NJW4 275 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 AP2S1P53680 142 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 PSMA6P60900 246 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF385CQ66K41 422 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms