RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR2T33Q8NG76 320 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR6N1Q8NGY5 312 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF519Q8TB69 540 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 HDAC2Q92769 488 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF566Q969W8 418 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 RIBC2Q9H4K1 309 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 KCNJ16Q9NPI9 418 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 JKAMPQ9P055 326 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 NKX2-6A6NCS4 301 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 WIPF3A6NGB9 483 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR6C65A6NJZ3 312 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 XKRYO14609 159 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 ARHGEF9O43307 516 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 IDH3BO43837 385 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 CLDN14O95500 239 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 RNF224P0DH78 156 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 PGA4P0DJD7 388 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 PGA3P0DJD8 388 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 EPHA2P29317 976 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 CSNK1A1P48729 337 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 RAD23AP54725 363 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 MYBPC1Q00872 1141 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 FAPQ12884 760 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 KRR1Q13601 381 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 MESTQ5EB52 335 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 PHYHD1Q5SRE7 291 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC27A4Q6P1M0 643 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 LNX2Q8N448 690 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 POMGNT2Q8NAT1 580 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR4K13Q8NH42 304 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 LRR1Q96L50 414 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 MRPL13Q9BYD1 178 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 LINC00470Q9BZP3 86 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 FOXD3Q9UJU5 478 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 BAIAP2Q9UQB8 552 aa13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-204ENST00000617222 H7C1C5 153 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 HIST1H1CP16403 213 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 CDH2P19022 906 aaPredicted RBP13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 CDKN2AP42771 156 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 ASCL1P50553 236 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 LCN6P62502 163 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 CDK5Q00535 292 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 NPRL3Q12980 569 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 PGGHGQ32M88 737 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 LRFN4Q6PJG9 635 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 Q6ZT83 130 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 LINGO2Q7L985 606 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR52E2Q8NGJ4 325 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 SSC4DQ8WTU2 575 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 ALG12Q9BV10 488 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 RBM24Q9BX46 236 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 ASB6Q9NWX5 421 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 GLTPQ9NZD2 209 aa13.78□□□□□ -0.2
PCDHGC3-204ENST00000617222 PRSS37A4D1T9 235 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CLEC18AA5D8T8 446 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CENPBD1B2RD01 187 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 HMGN1P05114 100 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 QDPRP09417 244 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 GRK5P34947 590 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 FOXG1P55316 489 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 ROR2Q01974 943 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CD47Q08722 323 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 FAM27E3Q08E93 113 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 NCOA6Q14686 2063 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 C9orf135Q5VTT2 229 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 LEG1Q6P5S2 330 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CLEC18BQ6UXF7 455 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 PTCHD4Q6ZW05 846 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 JAZF1Q86VZ6 243 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 GABRG1Q8N1C3 465 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 CLEC18CQ8NCF0 446 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 NOXO1Q8NFA2 376 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 MCHR2Q969V1 340 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 ALKBH3Q96Q83 286 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 RBP7Q96R05 134 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 NMNAT3Q96T66 252 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 GABARAPL3Q9BY60 117 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 ULBP2Q9BZM5 246 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 TOR3AQ9H497 397 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC25A19Q9HC21 320 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 GPR35Q9HC97 309 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 MALT1Q9UDY8 824 aa13.77□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC22A23A1A5C7 686 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZAR1LA6NP61 321 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms