RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 DENND2DQ9H6A0 471 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 MYEF2Q9P2K5 600 aaKnown RBP17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 FZR1Q9UM11 496 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 CHP2O43745 196 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 FMO6PO60774 539 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 ERLIN1O75477 346 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 HPXP02790 462 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 PATE4P0C8F1 98 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 SRP14P37108 136 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 ATP4BP51164 291 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 GALK2Q01415 458 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 MAD2L1BPQ15013 274 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 DUSP7Q16829 419 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 RUNDC3AQ59EK9 446 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 ZNF613Q6PF04 617 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 CARM1Q86X55 608 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 ZNF584Q8IVC4 421 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 SKA3Q8IX90 412 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 RFLNBQ8N5W9 214 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 GPR32P1Q8NGA4 272 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 TMEM54Q969K7 222 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 MS4A5Q9H3V2 200 aa17.85■□□□□ 0.45
TRAPPC3-208ENST00000616074 CPSF4LA6NMK7 179 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 HAX1O00165 279 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 TCF21O43680 179 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 THY1P04216 161 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 C8BP07358 591 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 COL8A2P25067 703 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 DVL1P1P54792 670 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 RPS23P62266 143 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 ZNF74Q16587 644 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 ENTPD8Q5MY95 495 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 AGBL2Q5U5Z8 902 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 SLC35D2Q76EJ3 337 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 OR6T1Q8NGN1 323 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 GLTPQ9NZD2 209 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 FBXL3Q9UKT7 428 aa17.84■□□□□ 0.45
TRAPPC3-208ENST00000616074 M0QX08 132 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR6A2O95222 327 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 LYPD3O95274 346 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 GPR6P46095 362 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 SELPLGQ14242 412 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 MELKQ14680 651 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 UGT2A3Q6UWM9 527 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 RINLQ6ZS11 566 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 PIWIL3Q7Z3Z3 882 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 DHDDSQ86SQ9 333 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 RBM45Q8IUH3 476 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC22A24Q8N4F4 322 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 C11orf65Q8NCR3 313 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR4D11Q8NGI4 311 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR6X1Q8NH79 312 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 NARFLQ9H6Q4 476 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 TAS2R5Q9NYW4 299 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC7A8Q9UHI5 535 aa17.83■□□□□ 0.44
TRAPPC3-208ENST00000616074 CH25HO95992 272 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 SERPINA5P05154 406 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 ITGA2P17301 1181 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 ACHEP22303 614 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 MTPNP58546 118 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 RBBP4Q09028 425 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZP4Q12836 540 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 CYP51A1Q16850 503 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 TSPYL5Q86VY4 417 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 LRRC17Q8N6Y2 441 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 CLDND2Q8NHS1 167 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 VANGL1Q8TAA9 524 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 ADAMTS16Q8TE57 1224 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 RDH5Q92781 318 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 YIPF5Q969M3 257 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 DUSP13Q9UII6 198 aa17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 LEF1Q9UJU2 399 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-208ENST00000616074 A0A1W2PPW3 197 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 B4DSR2 109 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 KPNA4O00629 521 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 RNF13O43567 381 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 NCR1O76036 304 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 NAT2P11245 290 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 LSP1P33241 339 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 ALKBH6Q3KRA9 238 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 TTC33Q6PID6 262 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 LRFN4Q6PJG9 635 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 RETREG3Q86VR2 466 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF566Q969W8 418 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 SH3GL3Q99963 347 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 RACGAP1Q9H0H5 632 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 NANSQ9NR45 359 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF275Q9NSD4 429 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 TMEM38BQ9NVV0 291 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC7A7Q9UM01 511 aa17.81■□□□□ 0.44
TRAPPC3-208ENST00000616074 FAM157AC9JC47 383 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 WNT9BO14905 357 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 PGA4P0DJD7 388 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 PGA3P0DJD8 388 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR8G3PP0DMU2 310 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 SAGP10523 405 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 CD247P20963 164 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 PCMT1P22061 227 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 REP15Q6BDI9 236 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 GLCCI1Q86VQ1 547 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms