RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 EVA1AQ9H8M9 152 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A1B0GV50 99 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ACOT7O00154 380 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 HSPB6O14558 160 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 DSCR3O14972 297 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ZGLP1P0C6A0 271 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 RPL27P61353 136 aaKnown RBP8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ARG2P78540 354 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 C17orf67Q0P5P2 114 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 TNK1Q13470 666 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 OXA1LQ15070 435 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 OR2T35Q8NGX2 323 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 STT3BQ8TCJ2 826 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 CHD5Q8TDI0 1954 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 SLC35B4Q969S0 331 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ANKRD9Q96BM1 317 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 C20orf85Q9H1P6 137 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 SMOC1Q9H4F8 434 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 TREM1Q9NP99 234 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 C12orf4Q9NQ89 552 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ABRACLQ9P1F3 81 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 STEAP1Q9UHE8 339 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 MUTYHQ9UIF7 546 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 H0YIG0 161 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 CRYBB2P43320 205 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 CAPZA1P52907 286 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 PER3P56645 1201 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 KCTD20Q7Z5Y7 419 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 OR13C9Q8NGT0 318 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 TAAR8Q969N4 342 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 SCGB3A2Q96PL1 93 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 SORCS2Q96PQ0 1159 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 SEMA4CQ9C0C4 833 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 MED29Q9NX70 200 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 KCNG2Q9UJ96 466 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 FBXO9Q9UK97 447 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 UGT2A1Q9Y4X1 527 aa8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 GOLGA4Q13439 2230 aaKnown RBP8.15□□□□□ -1.11
PDLIM5-222ENST00000615540 MBTPS2O43462 519 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 IFNA21P01568 189 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 RLN2P04090 185 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CSF3P09919 207 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CALCBP10092 127 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 ANXA7P20073 488 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 MAGEB1P43366 347 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 VAMP2P63027 116 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 TEKQ02763 1124 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 RNASE10Q5GAN6 216 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 ZAR1Q86SH2 424 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 PLCZ1Q86YW0 608 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 OR51D1Q8NGF3 324 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 OR5D14Q8NGL3 314 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 RNF170Q96K19 258 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 URM1Q9BTM9 101 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CAMK2AQ9UQM7 478 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 TSC2P49815 1807 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 ZNF736B4DX44 427 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CTSBP07858 339 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 SDHAP31040 664 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 ZNF117Q03924 483 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 GRK1Q15835 563 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 ACKR1Q16570 336 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 NKAIN1Q4KMZ8 207 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 YIF1BQ5BJH7 314 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 AUNIPQ9H7T9 357 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 FRG2CA6NGY1 282 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 A8MVM7 634 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 PMP2P02689 132 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 DPP4P27487 766 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 MFSD13AQ14CX5 517 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 MOB3CQ70IA8 216 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 EGFL6Q8IUX8 553 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 SLIRPQ9GZT3 109 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 LAT2Q9GZY6 243 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 HHLA2Q9UM44 414 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 TNFSF11O14788 317 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 FCGR2AP12318 317 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 HTR2CP28335 458 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 GPLD1P80108 840 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 GPR176Q14439 515 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 YRDCQ86U90 279 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CCDC36Q8IYA8 594 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 HAVCR1Q96D42 359 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 SLA2Q9H6Q3 261 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 A0A0B4J2E0 115 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 A0A1B0GX12 115 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CIB4A0PJX0 185 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 TRIM64CA6NLI5 447 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 SLC22A5O76082 557 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CBX7O95931 251 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 BCKDHBP21953 392 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 UQCRC1P31930 480 aa8.14□□□□□ -1.11
PDLIM5-222ENST00000615540 CDAP32320 146 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms