RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PLA2G12AQ9BZM1 189 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 RERGLQ9H628 205 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 YY1AP1Q9H869 796 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 LYNX1G3V0Z9 82 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 FMO6PO60774 539 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 TRMUO75648 421 aaKnown RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 RAF1P04049 648 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 LYNX1P0DP58 116 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 CD79AP11912 226 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 RRM2P31350 389 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 MST1LQ2TV78 715 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF672Q499Z4 452 aaPredicted RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 BEX5Q5H9J7 111 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 NANOGNBQ7Z5D8 188 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 TGIF2LYQ8IUE0 185 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 STEAP2Q8NFT2 490 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 MCHR2Q969V1 340 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 SGTBQ96EQ0 304 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 DTNBP1Q96EV8 351 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 Q96MF0 132 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ASPNQ9BXN1 380 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 EGLN3Q9H6Z9 239 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 RASD1Q9Y272 281 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 RNF115Q9Y4L5 304 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ENPP4Q9Y6X5 453 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 YLPM1P49750 1951 aaKnown RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF587BE7ETH6 402 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OR2T1O43869 369 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 FZD7O75084 574 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OR5F1O95221 314 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PRKACGP22612 351 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OMPP47874 163 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 FXNQ16595 210 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 MESTQ5EB52 335 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 CLEC12AQ5QGZ9 265 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ARMC4Q5T2S8 1044 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF730Q6ZMV8 503 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PXKQ7Z7A4 578 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 CPEB3Q8NE35 698 aaKnown RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OR4K5Q8NGD3 323 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OR6N1Q8NGY5 312 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 SMAP2Q8WU79 429 aaPredicted RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 HSD17B8Q92506 261 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 KATNB1Q9BVA0 655 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 HS3ST1O14792 307 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 DNPH1O43598 174 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 SOX14O95416 240 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 IGHV4-39P01824 125 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 PTDSS1P48651 473 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 CTXN1P60606 82 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 RAB39AQ14964 217 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 SPRNQ5BIV9 151 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 Q5PR19 223 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 SLC35F1Q5T1Q4 408 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 HMBOX1Q6NT76 420 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF813Q6ZN06 617 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 TRPM8Q7Z2W7 1104 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 OFCC1Q8IZS5 231 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 ASB10Q8WXI3 467 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 NANOS1Q8WY41 292 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 LRRC46Q96FV0 321 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 PYURFQ96I23 114 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 MRPL13Q9BYD1 178 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 ULBP2Q9BZM5 246 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 FKRPQ9H9S5 495 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 C12orf10Q9HB07 376 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 GP6Q9HCN6 339 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 EMC7Q9NPA0 242 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 POU2F3Q9UKI9 436 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 MED31Q9Y3C7 131 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 UGT2A1Q9Y4X1 527 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 HIVEP2P31629 2446 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 ACOT8O14734 319 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 DCTN3O75935 186 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 CD3EP07766 207 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 FAM157BP0CG42 384 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 HSD17B1P14061 328 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 PRDX6P30041 224 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 LIMS1P48059 325 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 CDH11P55287 796 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 NKX6-1P78426 367 aaPredicted RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 SPIBQ01892 262 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 OAFQ86UD1 273 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 OR51L1Q8NGJ5 315 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 AKR7LQ8NHP1 331 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 CANT1Q8WVQ1 401 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 MUCL1Q96DR8 90 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 FBXO17Q96EF6 278 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 TACO1Q9BSH4 297 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 CADM1Q9BY67 442 aaKnown RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 GLTPQ9NZD2 209 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF99A8MXY4 864 aaPredicted RBP4.94□□□□□ -1.62
CPNE3-208ENST00000614678 SOCS2O14508 198 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 WNT11O96014 354 aa4.94□□□□□ -1.62
CPNE3-208ENST00000614678 TSPAN19P0C672 248 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms