RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PRAMEF25A6NGN4 478 aa12□□□□□ -0.49
TCF3-220ENST00000611869 DSCR3O14972 297 aa12□□□□□ -0.49
TCF3-220ENST00000611869 EFEMP2O95967 443 aa12□□□□□ -0.49
TCF3-220ENST00000611869 MT-ATP6P00846 226 aa12□□□□□ -0.49
TCF3-220ENST00000611869 APOC1P02654 83 aa12□□□□□ -0.49
TCF3-220ENST00000611869 LSSP48449 732 aa12□□□□□ -0.49
TCF3-220ENST00000611869 CD163Q86VB7 1156 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
TCF3-220ENST00000611869 LRRC18Q8N456 261 aa12□□□□□ -0.49
TCF3-220ENST00000611869 SMRP1Q8NCR6 262 aa12□□□□□ -0.49
TCF3-220ENST00000611869 TMEM52Q8NDY8 209 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ULBP2Q9BZM5 246 aa12□□□□□ -0.49
TCF3-220ENST00000611869 LAT2Q9GZY6 243 aa12□□□□□ -0.49
TCF3-220ENST00000611869 RABL2AQ9UBK7 228 aaPredicted RBP12□□□□□ -0.49
TCF3-220ENST00000611869 RABL2BQ9UNT1 228 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ZSCAN5BA6NJL1 495 aa12□□□□□ -0.49
TCF3-220ENST00000611869 GJE1A6NN92 205 aa12□□□□□ -0.49
TCF3-220ENST00000611869 HRKO00198 91 aa12□□□□□ -0.49
TCF3-220ENST00000611869 P2RY10O00398 339 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ARPC5O15511 151 aa12□□□□□ -0.49
TCF3-220ENST00000611869 SLC2A1P11166 492 aa12□□□□□ -0.49
TCF3-220ENST00000611869 LANCL3Q6ZV70 420 aa12□□□□□ -0.49
TCF3-220ENST00000611869 COX15Q7KZN9 410 aa12□□□□□ -0.49
TCF3-220ENST00000611869 DCXRQ7Z4W1 244 aa12□□□□□ -0.49
TCF3-220ENST00000611869 MFSD4AQ8N468 514 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ARIH2OSQ8N7S6 290 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ZNF615Q8N8J6 731 aa12□□□□□ -0.49
TCF3-220ENST00000611869 GIMAP1Q8WWP7 306 aa12□□□□□ -0.49
TCF3-220ENST00000611869 ELMOD3Q96FG2 381 aa12□□□□□ -0.49
TCF3-220ENST00000611869 TXNDC15Q96J42 360 aa12□□□□□ -0.49
TCF3-220ENST00000611869 KLF15Q9UIH9 416 aa12□□□□□ -0.49
TCF3-220ENST00000611869 A0A087WUJ7 227 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 SLC22A5O76082 557 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 SFTPBP07988 381 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CSF1P09603 554 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CSF3P09919 207 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 ERGP11308 486 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 GDF1P27539 372 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 PER3P56645 1201 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 SLC26A5P58743 744 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CDK5R1Q15078 307 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 C5orf46Q6UWT4 87 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CD300LDQ6UXZ3 194 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 LRRC69Q6ZNQ3 347 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 FAM57BQ71RH2 274 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 H1FNTQ75WM6 255 aaPredicted RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 WFDC6Q9BQY6 131 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 DNAJB12Q9NXW2 375 aaKnown RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 RP2O75695 350 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 EVI2BP34910 448 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 GLP1RP43220 463 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 EVX1P49640 407 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CCDC58Q4VC31 144 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CBLN3Q6UW01 205 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 SUN5Q8TC36 379 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 FYTTD1Q96QD9 318 aaKnown RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 SLC6A15Q9H2J7 730 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 VWA8A3KMH1 1905 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 GOSR2O14653 212 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 TCRBP04435 133 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 ZGLP1P0C6A0 271 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 AKAIN1P0CW23 69 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 FOLR1P15328 257 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 HTR2AP28223 471 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 RBMXP38159 391 aaKnown RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 CAPZA1P52907 286 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CSNK2A1P68400 391 aaPredicted RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 CXADRP78310 365 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 TMEM201Q5SNT2 666 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CCDC190Q86UF4 302 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 C7orf50Q9BRJ6 194 aaKnown RBP11.99□□□□□ -0.49
TCF3-220ENST00000611869 MED29Q9NX70 200 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CES1P1Q9UKY3 287 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 CAMK2AQ9UQM7 478 aa11.99□□□□□ -0.49
TCF3-220ENST00000611869 A0A1W2PNR3 127 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 TRABD2BA6NFA1 517 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 CORO6Q6QEF8 472 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 OR1J4Q8NGS1 313 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SPTSSAQ969W0 71 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 C3orf49Q96BT1 292 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SMIM19Q96E16 107 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 KTI12Q96EK9 354 aaPredicted RBP11.98□□□□□ -0.49
TCF3-220ENST00000611869 MNTQ99583 582 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SLC19A3Q9BZV2 496 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 PCOLCE2Q9UKZ9 415 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 ZSWIM8A7E2V4 1837 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SMLR1H3BR10 107 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 HTR3BO95264 441 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 ALDOBP05062 364 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 NPR2P20594 1047 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 PSMB1P20618 241 aaKnown RBP11.98□□□□□ -0.49
TCF3-220ENST00000611869 SSTR2P30874 369 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 SSR4P51571 173 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 PSG6Q00889 435 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 FCN2Q15485 313 aa11.98□□□□□ -0.49
TCF3-220ENST00000611869 C9orf135Q5VTT2 229 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms