RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 IGHG1P01857 330 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 FABP3P05413 133 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 PGA4P0DJD7 388 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 PGA3P0DJD8 388 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 DAP3P51398 398 aaKnown RBP22.72■■□□□ 1.23
VEGFA-226ENST00000611736 CLRN1P58418 232 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 RPS4XP62701 263 aaKnown RBP22.72■■□□□ 1.23
VEGFA-226ENST00000611736 SPIBQ01892 262 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 TOP3AQ13472 1001 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-226ENST00000611736 C1QTNF12Q5T7M4 302 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 OAFQ86UD1 273 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 PIGTQ969N2 578 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 FBXW5Q969U6 566 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 C1orf21Q9H246 121 aa22.72■■□□□ 1.23
VEGFA-226ENST00000611736 HOXB1P14653 301 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-226ENST00000611736 CAPZA2P47755 286 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 SEC23BQ15437 767 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 ZNF813Q6ZN06 617 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 IGFN1Q86VF2 1251 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 DHFR2Q86XF0 187 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 CCDC124Q96CT7 223 aaKnown RBP22.71■■□□□ 1.23
VEGFA-226ENST00000611736 FAM46AQ96IP4 442 aaKnown RBP22.71■■□□□ 1.23
VEGFA-226ENST00000611736 RADILQ96JH8 1075 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 DHRS1Q96LJ7 313 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 TNFRSF13CQ96RJ3 184 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 SEPHS2Q99611 448 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 THTPAQ9BU02 230 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 CXXC4Q9H2H0 198 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 MUC13Q9H3R2 512 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 POU2F3Q9UKI9 436 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 TMEM5Q9Y2B1 443 aa22.71■■□□□ 1.23
VEGFA-226ENST00000611736 CDC42EP2O14613 210 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 B4GALT1P15291 398 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 SLC9A3P48764 834 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 MS4A2Q01362 244 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 TRIM25Q14258 630 aaKnown RBP22.7■■□□□ 1.22
VEGFA-226ENST00000611736 MTX3Q5HYI7 312 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 TMPRSS11FQ6ZWK6 438 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 HDDC2Q7Z4H3 204 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 ZDHHC21Q8IVQ6 265 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 SYT14Q8NB59 555 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 NOXO1Q8NFA2 376 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 ZNF347Q96SE7 839 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 FOXB1Q99853 325 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 TXNIPQ9H3M7 391 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 IL1RAPQ9NPH3 570 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 CISD1Q9NZ45 108 aaKnown RBP22.7■■□□□ 1.22
VEGFA-226ENST00000611736 LAMP3Q9UQV4 416 aa22.7■■□□□ 1.22
VEGFA-226ENST00000611736 IGHV1-18A0A0C4DH31 117 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 ZNF503-AS2A6NEH8 195 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 SMPD2O60906 423 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 TRMUO75648 421 aaKnown RBP22.69■■□□□ 1.22
VEGFA-226ENST00000611736 QDPRP09417 244 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 ACADSP16219 412 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 SMIM11AP58511 58 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 CTXN1P60606 82 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 MYBPC1Q00872 1141 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 FHL1Q13642 323 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 ARMC4Q5T2S8 1044 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 LCN8Q6JVE9 175 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 LRFN4Q6PJG9 635 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 SPNS3Q6ZMD2 512 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 DEPDC4Q8N2C3 294 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 OR4K5Q8NGD3 323 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 SMAP2Q8WU79 429 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-226ENST00000611736 SLC38A2Q96QD8 506 aa22.69■■□□□ 1.22
VEGFA-226ENST00000611736 TCRBV5S2A0A599 114 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 GADD45GO95257 159 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 ANKDD1AQ495B1 522 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 MDP1Q86V88 176 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 LRRC75AQ8NAA5 344 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 TMEM171Q8WVE6 324 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 FUZQ9BT04 418 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 MRPL13Q9BYD1 178 aaKnown RBP22.68■■□□□ 1.22
VEGFA-226ENST00000611736 ATP23Q9Y6H3 246 aa22.68■■□□□ 1.22
VEGFA-226ENST00000611736 NPIPB13A6NJU9 1138 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 NPIPB4C9JG80 1138 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 GYG2O15488 501 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 DHHO43323 396 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 HLA-HP01893 362 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 SOD3P08294 240 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 CD79AP11912 226 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 RRM2P31350 389 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 OMPP47874 163 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 RPL27P61353 136 aaKnown RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 ZBED5Q49AG3 693 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 B3GLCTQ6Y288 498 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 HDAC2Q92769 488 aaKnown RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 MCHR2Q969V1 340 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 KRCC1Q9NPI7 259 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 STX18Q9P2W9 335 aaKnown RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 CRNNQ9UBG3 495 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 ZNF346Q9UL40 294 aaKnown RBP22.67■■□□□ 1.22
VEGFA-226ENST00000611736 MOKQ9UQ07 419 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 AURKCQ9UQB9 309 aa22.67■■□□□ 1.22
VEGFA-226ENST00000611736 FLNAP21333 2647 aaKnown RBP22.66■■□□□ 1.22
VEGFA-226ENST00000611736 SH3PXD2BA1X283 911 aa22.66■■□□□ 1.22
VEGFA-226ENST00000611736 E7EQL1 145 aa22.66■■□□□ 1.22
VEGFA-226ENST00000611736 ATP6V1G2-DDX39BF2Z307 99 aa22.66■■□□□ 1.22
VEGFA-226ENST00000611736 IGHMP01871 453 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms