RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 GOLGA6L19H0YKK7 550 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 H3BMM5 538 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 TXNDC9O14530 226 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 LANCL1O43813 399 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 GAS8O95995 478 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 PAHP00439 452 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 HPNP05981 417 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CRHP06850 196 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 FGF4P08620 206 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 TPM1P09493 284 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ZNF735P0CB33 412 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 RALBP11234 206 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ENO3P13929 434 aaPredicted RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SELEP16581 610 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ATP6V1C1P21283 382 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 HTR2AP28223 471 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 PRDX6P30041 224 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 HMGCLP35914 325 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CETN2P41208 172 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 BTG2P78543 158 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CCZ1BP86790 482 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CCZ1P86791 482 aaPredicted RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 BAMBIQ13145 260 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 UBE2V1Q13404 147 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ARHGAP19Q14CB8 494 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 HADHQ16836 314 aaKnown RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CTU2Q2VPK5 515 aaKnown RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ALG10Q5BKT4 473 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 ALG10BQ5I7T1 473 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 FAM182AQ5T1J6 154 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SLC22A10Q63ZE4 541 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 OLFML2AQ68BL7 652 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 OR2A2Q6IF42 318 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 OPN5Q6U736 354 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SCIMPQ6UWF3 145 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SBSNQ6UWP8 590 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 BTNL8Q6UX41 500 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SYT10Q6XYQ8 523 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SLC16A9Q7RTY1 509 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 MUC20Q8N307 709 aaPredicted RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 GCSAMQ8N6F7 178 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 TEX29Q8N6K0 151 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 BHLHE23Q8NDY6 225 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 OR5T3Q8NGG3 340 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 VANGL1Q8TAA9 524 aaPredicted RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 DTX3LQ8TDB6 740 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 TADA1Q96BN2 335 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 S100PBPQ96BU1 408 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 PAGE5Q96GU1 130 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 FAM81BQ96LP2 452 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 C1orf147Q96MC9 270 aaPredicted RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 OR2A5Q96R48 311 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 USP28Q96RU2 1077 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 TRIB3Q96RU7 358 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 B9D2Q9BPU9 175 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 DOHHQ9BU89 302 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SIRPDQ9H106 197 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 EHD1Q9H4M9 534 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 BEX1Q9HBH7 125 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 PROK2Q9HC23 129 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 HHATLQ9HCP6 504 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 RPRD1BQ9NQG5 326 aaKnown RBP3.67□□□□□ -1.82
LINC00540-201ENST00000611481 SH3GLB1Q9Y371 365 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 RAP2CQ9Y3L5 183 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 KLK4Q9Y5K2 254 aa3.67□□□□□ -1.82
LINC00540-201ENST00000611481 C5orf63A6NC05 138 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 GOLGA8OA6NCC3 632 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 HNRNPCL2B2RXH8 293 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 E7EQL1 145 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 E9PI62 339 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 GOLGA8NF8WBI6 632 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 LGALS8O00214 317 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 PSMD3O43242 534 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 EMC8O43402 210 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 LSM8O95777 96 aaKnown RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 ACTL6AO96019 429 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 C1QAP02745 245 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 S100A9P06702 114 aaKnown RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 TACSTD2P09758 323 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 ANXA8P13928 327 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 ATP1B2P14415 290 aaPredicted RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 CPN1P15169 458 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 JAK1P23458 1154 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 DCTDP32321 178 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 GCKP35557 465 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 RPL21P46778 160 aaKnown RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 OR3A1P47881 315 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 FABP6P51161 128 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 MMP15P51511 669 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 STX17P56962 302 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 CSNK2A1P68400 391 aaPredicted RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 FKBP3Q00688 224 aaKnown RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 GK2Q14410 553 aaPredicted RBP3.66□□□□□ -1.82
LINC00540-201ENST00000611481 PDK3Q15120 406 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 STK38Q15208 465 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 TRIP10Q15642 601 aa3.66□□□□□ -1.82
LINC00540-201ENST00000611481 STK11Q15831 433 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms