RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RNF113BQ8IZP6 322 aaKnown RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 OR6N1Q8NGY5 312 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ASB10Q8WXI3 467 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ADAD1Q96M93 576 aaKnown RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 NSMCE2Q96MF7 247 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 TNFRSF13CQ96RJ3 184 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 SEPHS2Q99611 448 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 CCL19Q99731 98 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 MRPL13Q9BYD1 178 aaKnown RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 NOX3Q9HBY0 568 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 GLTPQ9NZD2 209 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 EDARQ9UNE0 448 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 TRAV27A0A087WT01 109 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 A0A1W2PRQ8 180 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 HTR3EA5X5Y0 456 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 PDE5AO76074 875 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 UBOX5O94941 541 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 BCL10O95999 233 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 WNT11O96014 354 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 IGLV1-44P01699 117 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 H1F0P07305 194 aaKnown RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 CELA3BP08861 270 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 HOXC12P31275 282 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 IFNA8P32881 189 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 GPR4P46093 362 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ADAM8P78325 824 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 DGCR6Q14129 220 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 C1QTNF12Q5T7M4 302 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 KLHL17Q6TDP4 642 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 KLHL24Q6TFL4 600 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 CYP2R1Q6VVX0 501 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ZNF730Q6ZMV8 503 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 TRPM8Q7Z2W7 1104 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 IGFN1Q86VF2 1251 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 CYP4Z1Q86W10 505 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 OR13C2Q8NGS9 318 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 OR51A7Q8NH64 312 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 FGFBP3Q8TAT2 258 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 SMAP2Q8WU79 429 aaPredicted RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 HTRA1Q92743 480 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 HDAC2Q92769 488 aaKnown RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 FBXW5Q969U6 566 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 NMD3Q96D46 503 aaKnown RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 SLC25A44Q96H78 314 aaPredicted RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 CLPTM1LQ96KA5 538 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ZNF347Q96SE7 839 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 GPA33Q99795 319 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ULBP2Q9BZM5 246 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 OBP2BQ9NPH6 170 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
CD9-212ENST00000610354 ACTR3BQ9P1U1 418 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 ARFGEF3Q5TH69 2177 aa11.1□□□□□ -0.63
CD9-212ENST00000610354 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 EFCAB9A8MZ26 197 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ATP6V1G2-DDX39BF2Z307 99 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 OVOL3O00110 214 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 DHHO43323 396 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 PTP4A3O75365 173 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 GMNNO75496 209 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 B4GALT1P15291 398 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 CALCRP30988 508 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 OMPP47874 163 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 LIMS1P48059 325 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 CDH11P55287 796 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 UBE2NP61088 152 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 MYBPC1Q00872 1141 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ALG10Q5BKT4 473 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 MDP1Q86V88 176 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 WFDC11Q8NEX6 87 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 OR52J3Q8NH60 311 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 PIGTQ969N2 578 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF566Q969W8 418 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 SLC7A6OSQ96CW6 309 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 FAM46AQ96IP4 442 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 SLC38A2Q96QD8 506 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 FOXB1Q99853 325 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 TXNIPQ9H3M7 391 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 B3GAT2Q9NPZ5 323 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF346Q9UL40 294 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 MGAT4BQ9UQ53 548 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 MAGED1Q9Y5V3 778 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 FLNAP21333 2647 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 A0A1W2PRG6 482 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 MCIDASD6RGH6 385 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 SMPD2O60906 423 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 IGHMP01871 453 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms