RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 SPNS3Q6ZMD2 512 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 ZDHHC21Q8IVQ6 265 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 FBXW5Q969U6 566 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 LRGUKQ96M69 825 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 FUZQ9BT04 418 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 THTPAQ9BU02 230 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 TRIM15Q9C019 465 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 CXXC4Q9H2H0 198 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 CCM2LQ9NUG4 571 aaPredicted RBP12.49□□□□□ -0.41
HDDC2-206ENST00000608461 FAIMQ9NVQ4 179 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 CRNNQ9UBG3 495 aaPredicted RBP12.49□□□□□ -0.41
HDDC2-206ENST00000608461 PLEKHA6Q9Y2H5 1048 aa12.49□□□□□ -0.41
HDDC2-206ENST00000608461 TCRBV5S2A0A599 114 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ABCD4O14678 606 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 AHCYL1O43865 530 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ACADSP16219 412 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 FUT4P22083 530 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ARR3P36575 388 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF83P51522 516 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 CLRN1P58418 232 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 RPL27P61353 136 aaKnown RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 LSM11P83369 360 aaKnown RBP eCLIP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 MS4A2Q01362 244 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 BNIP1Q12981 228 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 TESK1Q15569 626 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF672Q499Z4 452 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 PGM2L1Q6PCE3 622 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 TBPL2Q6SJ96 375 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 DPPA2Q7Z7J5 298 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 OR4K5Q8NGD3 323 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 AKAP1Q92667 903 aaKnown RBP eCLIP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 SLC7A6OSQ96CW6 309 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-206ENST00000608461 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 FOXB1Q99853 325 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 UBTD1Q9HAC8 227 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 FBXL3Q9UKT7 428 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 V9GYQ6 96 aa12.48□□□□□ -0.41
HDDC2-206ENST00000608461 TRBV4-1A0A0J9YWV2 114 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 A0A1W2PR80 420 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 A6NIZ1 184 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 AQP12BA6NM10 295 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 SHISA9B4DS77 424 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 M0R1B8 84 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ACOT8O14734 319 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 DHHO43323 396 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 PTP4A3O75365 173 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-206ENST00000608461 PDE5AO76074 875 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 PLAUP00749 431 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 IGKV3-15P01624 115 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 CBR1P16152 277 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ATP6V1B2P21281 511 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 OMPP47874 163 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 LIMS1P48059 325 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 RAP1BP61224 184 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 RAP1AP62834 184 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 SPIBQ01892 262 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 FHL1Q13642 323 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 MELKQ14680 651 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF813Q6ZN06 617 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 AQP12AQ8IXF9 295 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 LRRC75A-AS1Q8N1F1 130 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 LRRC75AQ8NAA5 344 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 NOXO1Q8NFA2 376 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 OR52J3Q8NH60 311 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 OR51A7Q8NH64 312 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-206ENST00000608461 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 CCL19Q99731 98 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 KATNB1Q9BVA0 655 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 MMADHCQ9H3L0 296 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-206ENST00000608461 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 MYO9AB2RTY4 2548 aa12.47□□□□□ -0.41
HDDC2-206ENST00000608461 ALPK2Q86TB3 2170 aa12.46□□□□□ -0.41
HDDC2-206ENST00000608461 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
HDDC2-206ENST00000608461 A0A096LPE4 126 aa12.46□□□□□ -0.41
HDDC2-206ENST00000608461 A0A1W2PPZ6 126 aa12.46□□□□□ -0.41
HDDC2-206ENST00000608461 TRMUO75648 421 aaKnown RBP12.46□□□□□ -0.41
HDDC2-206ENST00000608461 DIRAS1O95057 198 aa12.46□□□□□ -0.41
HDDC2-206ENST00000608461 NDUFB2O95178 105 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms