RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SLC6A6P31641 620 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 ACVR1BP36896 505 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 RPS6KA3P51812 740 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 KPNB1Q14974 876 aaKnown RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 GABRA6Q16445 453 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 RFX4Q33E94 735 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 GPR139Q6DWJ6 353 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 ZNF770Q6IQ21 691 aaPredicted RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 IGFN1Q86VF2 1251 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 NRBF2Q96F24 287 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 ZC3HAV1LQ96H79 300 aaKnown RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 BOD1Q96IK1 185 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 GPX7Q96SL4 187 aaPredicted RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 PDP1Q9P0J1 537 aaPredicted RBP12.54□□□□□ -0.4
CTSA-219ENST00000607841 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
CTSA-219ENST00000607841 SPTAN1Q13813 2472 aaKnown RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 ZNF99A8MXY4 864 aaPredicted RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 XKRYO14609 159 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ENTPD5O75356 428 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 APEHP13798 732 aaKnown RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 CRYGSP22914 178 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 ERVK-25P63136 954 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 COX10Q12887 443 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 PPA1Q15181 289 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 TAB1Q15750 504 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ARIH2OSQ8N7S6 290 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 TSPAN32Q96QS1 320 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 RBP7Q96R05 134 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ALG12Q9BV10 488 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
CTSA-219ENST00000607841 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 NRIP3Q9NQ35 241 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 MPDZO75970 2070 aa12.53□□□□□ -0.4
CTSA-219ENST00000607841 HCFC1P51610 2035 aa12.52□□□□□ -0.4
CTSA-219ENST00000607841 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.4
CTSA-219ENST00000607841 CACNA1CQ13936 2221 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 A6NNC1 897 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 IMPA2O14732 288 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 AHCYL1O43865 530 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 WNT11O96014 354 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 QDPRP09417 244 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ANXA8P13928 327 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ZNF26P17031 533 aaPredicted RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 SDHAP31040 664 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 IST1P53990 364 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 ARF1P84077 181 aaKnown RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 TLE4Q04727 773 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 RUNX1T1Q06455 604 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 HIST3H3Q16695 136 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ALKBH2Q6NS38 261 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 ZNF620Q6ZNG0 422 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 RASSF6Q6ZTQ3 369 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 WFDC8Q8IUA0 241 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 CCDC36Q8IYA8 594 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ZNF295-AS1Q8N0V1 137 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 CLDN22Q8N7P3 220 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 SYT14Q8NB59 555 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 OR52L1Q8NGH7 329 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ZNF519Q8TB69 540 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 MCHR2Q969V1 340 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 GTPBP3Q969Y2 492 aaKnown RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 ZNF570Q96NI8 536 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 FEVQ99581 238 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
CTSA-219ENST00000607841 CDH10Q9Y6N8 788 aa12.52□□□□□ -0.41
CTSA-219ENST00000607841 ARHGEF9O43307 516 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 DHHO43323 396 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 IDH3BO43837 385 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms