RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 INPP5JQ15735 1006 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 PYY3Q5JQD4 70 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 LY6G6FQ5SQ64 297 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TSTD2Q5T7W7 516 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TAPT1Q6NXT6 567 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM107Q6UX40 140 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CDHR3Q6ZTQ4 885 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 LDLRAD3Q86YD5 345 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DTWD1Q8N5C7 304 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TTC9BQ8N6N2 239 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF283Q8N7M2 679 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF564Q8TBZ8 553 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC35C1Q96A29 364 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SCMH1Q96GD3 660 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM209Q96SK2 561 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 AGPAT1Q99943 283 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 NICN1Q9BSH3 213 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DUSP23Q9BVJ7 150 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FTHL17Q9BXU8 183 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ULBP1Q9BZM6 244 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CSTL1Q9H114 145 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CXorf36Q9H7Y0 433 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 NT5DC2Q9H857 520 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FTSJ1Q9UET6 329 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ST3GAL5Q9UNP4 418 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SH2B3Q9UQQ2 575 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 OR10H1Q9Y4A9 318 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF638Q14966 1978 aaKnown RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 A0A1B0GVI7 797 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SMIM22K7EJ46 135 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SGK494L7N484 410 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ADAM10O14672 748 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 EI24O14681 340 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TP53I11O14683 189 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DSCR3O14972 297 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 IFNA17P01571 189 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ST6GAL1P15907 406 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TBXA2RP21731 343 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SSTR1P30872 391 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 KIR2DL3P43628 341 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 PPT1P50897 306 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CTSCP53634 463 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CRYBA4P53673 196 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CLDN2P57739 230 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 RPS7P62081 194 aaKnown RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TLE4Q04727 773 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 C2orf80Q0P641 193 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 HYAL1Q12794 435 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 NFATC2Q13469 925 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC17A1Q14916 467 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 LY6KQ17RY6 165 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CTU2Q2VPK5 515 aaKnown RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 COX19Q49B96 90 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FFAR4Q5NUL3 377 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FAHD2BQ6P2I3 314 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 LCTLQ6UWM7 567 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF720Q7Z2F6 126 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 RBM23Q86U06 439 aaKnown RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 RANBP3LQ86VV4 465 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TEX26Q8N6G2 289 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DNERQ8NFT8 737 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 OR4Q3Q8NH05 313 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FAHD2AQ96GK7 314 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 MTERF1Q99551 399 aaKnown RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 GPA33Q99795 319 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 MARVELD1Q9BSK0 173 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 H2AFJQ9BTM1 129 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 MAP1LC3CQ9BXW4 147 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ELOVL4Q9GZR5 314 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 NMNAT1Q9HAN9 279 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 LHX9Q9NQ69 397 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CYSLTR2Q9NS75 346 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ING1Q9UK53 422 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CLEC4EQ9ULY5 219 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DOCK2Q92608 1830 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 K7ERI5 159 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 AP4M1O00189 453 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ENSAO43768 121 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC28A2O43868 658 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 UTS2O95399 124 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 FGF19O95750 216 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 NR3C1P04150 777 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MELTFP08582 738 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 LHCGRP22888 699 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CD200P41217 278 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 NPBWR1P48145 328 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 BTG1P62324 171 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 INSM1Q01101 510 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 IL5RAQ01344 420 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CDO1Q16878 200 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ITPRIPL2Q3MIP1 535 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 GGTA1PQ4G0N0 100 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 B3GNTL1Q67FW5 361 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 TXNDC8Q6A555 127 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 BICRALQ6AI39 1079 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CAPN13Q6MZZ7 669 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 GPSM1Q86YR5 675 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms