RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 FXYD6P3P58550 94 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 RAP1BP61224 184 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 RAP1AP62834 184 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 COX10Q12887 443 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 RFX4Q33E94 735 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ANKRD34AQ69YU3 496 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 HIST2H2BCQ6DN03 193 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 GPR139Q6DWJ6 353 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 RPL13AP3Q6NVV1 102 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 C22orf34Q6ZV56 151 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ZNF295-AS1Q8N0V1 137 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ARIH2OSQ8N7S6 290 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 AQP11Q8NBQ7 271 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 OR10G2Q8NGC3 310 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 OR6N1Q8NGY5 312 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 FNDC8Q8TC99 324 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ALKBH3Q96Q83 286 aaPredicted RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 BDH2Q9BUT1 245 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 KATNB1Q9BVA0 655 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 POLDIP3Q9BY77 421 aaKnown RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 CRLF2Q9HC73 371 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 NRIP3Q9NQ35 241 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 GLTPQ9NZD2 209 aa12.2□□□□□ -0.46
RNF40-212ENST00000602784 ZNF346Q9UL40 294 aaKnown RBP12.2□□□□□ -0.46
RNF40-212ENST00000602784 FAM221AA4D161 298 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 M0R3G1 203 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 IMPA2O14732 288 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TRMUO75648 421 aaKnown RBP12.19□□□□□ -0.46
RNF40-212ENST00000602784 RAD51DO75771 328 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TXNDC12O95881 172 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 THBDP07204 575 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 CRYGSP22914 178 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 PAX7P23759 505 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 SSTR2P30874 369 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ZNF133P52736 654 aaPredicted RBP12.19□□□□□ -0.46
RNF40-212ENST00000602784 IST1P53990 364 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 CLRN1P58418 232 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ERVK-25P63136 954 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 MELKQ14680 651 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TSC22D1Q15714 1073 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TAB1Q15750 504 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 PHYHD1Q5SRE7 291 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ANKRD16Q6P6B7 361 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 SHQ1Q6PI26 577 aaKnown RBP12.19□□□□□ -0.46
RNF40-212ENST00000602784 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ZNF620Q6ZNG0 422 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 RASSF6Q6ZTQ3 369 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ZNF627Q7L945 461 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 FAM122BQ7Z309 247 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TMEM179BQ7Z7N9 219 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 IGFN1Q86VF2 1251 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 OR1K1Q8NGR3 316 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 FANK1Q8TC84 345 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 MAGEE2Q8TD90 523 aaPredicted RBP12.19□□□□□ -0.46
RNF40-212ENST00000602784 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 TSPAN32Q96QS1 320 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 FEVQ99581 238 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ALG12Q9BV10 488 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 ULBP2Q9BZM5 246 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 OR52D1Q9H346 318 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 SMURF2Q9HAU4 748 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 OBP2BQ9NPH6 170 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 PDP1Q9P0J1 537 aaPredicted RBP12.19□□□□□ -0.46
RNF40-212ENST00000602784 GRHPRQ9UBQ7 328 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
RNF40-212ENST00000602784 A6NNC1 897 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 ARPC3O15145 178 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 IDH3BO43837 385 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 ANXA8P13928 327 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 SDHAP31040 664 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 SLC6A6P31641 620 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 ACVR1BP36896 505 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 RPS6KA3P51812 740 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 ARF1P84077 181 aaKnown RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 TOP3AQ13472 1001 aaPredicted RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 THEM4Q5T1C6 240 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 NOXO1Q8NFA2 376 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 BCL2L2Q92843 193 aaPredicted RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 ZNF837Q96EG3 531 aaPredicted RBP12.18□□□□□ -0.46
RNF40-212ENST00000602784 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
RNF40-212ENST00000602784 CDH10Q9Y6N8 788 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 664.6 ms