RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 BPIFA2Q96DR5 249 aa19.04■□□□□ 0.64
PPFIA3-208ENST00000602726 FOXB1Q99853 325 aa19.04■□□□□ 0.64
PPFIA3-208ENST00000602726 CACNG6Q9BXT2 260 aa19.04■□□□□ 0.64
PPFIA3-208ENST00000602726 ZNF503-AS2A6NEH8 195 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 FFAR1O14842 300 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 IGHG1P01857 330 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 HLA-HP01893 362 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 CD79AP11912 226 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 B4GALT1P15291 398 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 DAP3P51398 398 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 IDH3GP51553 393 aaPredicted RBP19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 RIPPLY3P57055 190 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 CLRN1P58418 232 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 C11orf71Q6IPW1 123 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 HDDC2Q7Z4H3 204 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 CIARTQ8N365 385 aaPredicted RBP19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 MOSPD2Q8NHP6 518 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 NANOS1Q8WY41 292 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 COX4I2Q96KJ9 171 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 SEC61A2Q9H9S3 476 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 BARX1Q9HBU1 254 aaPredicted RBP19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 MAN2C1Q9NTJ4 1040 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 ARL8BQ9NVJ2 186 aa19.03■□□□□ 0.64
PPFIA3-208ENST00000602726 ZFHX3Q15911 3703 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 SMAD7O15105 426 aaKnown RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 IGHV4-39P01824 125 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 CELA3BP08861 270 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 PGA4P0DJD7 388 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 PGA3P0DJD8 388 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 BMP4P12644 408 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 FUT4P22083 530 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 LSM11P83369 360 aaKnown RBP eCLIP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 CHRNB3Q05901 458 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 LAPTM4AQ15012 233 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 CLEC12BQ2HXU8 276 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 GSG1Q2KHT4 349 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 LRFN4Q6PJG9 635 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 ZNF730Q6ZMV8 503 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 NRMQ8IXM6 262 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 PGAM4Q8N0Y7 254 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 RBM15BQ8NDT2 890 aaKnown RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 CCT8L2Q96SF2 557 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 SMR3AQ99954 134 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 DCAF13Q9NV06 445 aaKnown RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 GDF2Q9UK05 429 aaPredicted RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 SAMD4AQ9UPU9 718 aaKnown RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 FAM32AQ9Y421 112 aaKnown RBP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 ENPP4Q9Y6X5 453 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 NF1P21359 2839 aa19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 NIPBLQ6KC79 2804 aaeCLIP19.02■□□□□ 0.64
PPFIA3-208ENST00000602726 DHHO43323 396 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 NDUFS7O75251 213 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 QDPRP09417 244 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 TSPAN19P0C672 248 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 SAGP10523 405 aaPredicted RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 TCN1P20061 433 aaPredicted RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 MXRA7P84157 204 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 PIGFQ07326 219 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 SAMD4BQ5PRF9 694 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 PIWIL3Q7Z3Z3 882 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 CDK20Q8IZL9 346 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 RNF113BQ8IZP6 322 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 ANKS4BQ8N8V4 417 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 FAM156AQ8NDB6 213 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 IL17RDQ8NFM7 739 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 OR4F15Q8NGB8 312 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 ASB10Q8WXI3 467 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 ACOT11Q8WXI4 607 aaPredicted RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 B3GNT2Q9NY97 397 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 STX18Q9P2W9 335 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 HIF3AQ9Y2N7 669 aa19.01■□□□□ 0.63
PPFIA3-208ENST00000602726 FAM171A2A8MVW0 826 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 ENTPD5O75356 428 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 PRSS23O95084 383 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 ACADSP16219 412 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 MAKP20794 623 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 CALCRP30988 508 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 ACVR1BP36896 505 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 PRKCDQ05655 676 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 RUNX1T1Q06455 604 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 TNK1Q13470 666 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 RAB35Q15286 201 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 ALG10Q5BKT4 473 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 VHLLQ6RSH7 139 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 C16orf89Q6UX73 402 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 RRM2BQ7LG56 351 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 MYPOPQ86VE0 399 aaPredicted RBP19■□□□□ 0.63
PPFIA3-208ENST00000602726 MEX3DQ86XN8 651 aaKnown RBP19■□□□□ 0.63
PPFIA3-208ENST00000602726 SYT14Q8NB59 555 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 NOXO1Q8NFA2 376 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 FBXO17Q96EF6 278 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 ZNF347Q96SE7 839 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 CDRT15Q96T59 188 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 GORASP2Q9H8Y8 452 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 NMNAT1Q9HAN9 279 aaPredicted RBP19■□□□□ 0.63
PPFIA3-208ENST00000602726 CA10Q9NS85 328 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 NDE1Q9NXR1 346 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 PMF1-BGLAPU3KQ54 211 aa19■□□□□ 0.63
PPFIA3-208ENST00000602726 TLN2Q9Y4G6 2542 aa18.99■□□□□ 0.63
PPFIA3-208ENST00000602726 A0A087WUU8 490 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms