RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RPS23P62266 143 aaKnown RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 RAB39AQ14964 217 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 MAD2L1BPQ15013 274 aaPredicted RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 FXNQ16595 210 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 DUSP7Q16829 419 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 RUNDC3AQ59EK9 446 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 ZNF613Q6PF04 617 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 UGT2A3Q6UWM9 527 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 LINC00114Q6XXX2 140 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 WDR88Q6ZMY6 472 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 PIWIL3Q7Z3Z3 882 aaKnown RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 CARM1Q86X55 608 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 FGFBP3Q8TAT2 258 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 ARHGDIGQ99819 225 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 DENND2DQ9H6A0 471 aaPredicted RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 MYEF2Q9P2K5 600 aaKnown RBP11.31□□□□□ -0.6
RPS28-204ENST00000602140 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
RPS28-204ENST00000602140 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
RPS28-204ENST00000602140 B4DSR2 109 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 M0QX08 132 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 TCF21O43680 179 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 CHP2O43745 196 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 FMO6PO60774 539 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 CH25HO95992 272 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 SERPINA5P05154 406 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 C8BP07358 591 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 LSP1P33241 339 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
RPS28-204ENST00000602140 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
RPS28-204ENST00000602140 PCBP3P57721 371 aaKnown RBP11.3□□□□□ -0.6
RPS28-204ENST00000602140 NPTX1Q15818 432 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 ENTPD8Q5MY95 495 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 AGBL2Q5U5Z8 902 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 RINLQ6ZS11 566 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 PTOV1Q86YD1 416 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 ZNF584Q8IVC4 421 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 GPR32P1Q8NGA4 272 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 OR6T1Q8NGN1 323 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 NARFLQ9H6Q4 476 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 TAS2R5Q9NYW4 299 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 GLTPQ9NZD2 209 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 FBXL3Q9UKT7 428 aa11.3□□□□□ -0.6
RPS28-204ENST00000602140 A0A1W2PPW3 197 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 RNF13O43567 381 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 LYPD3O95274 346 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 THY1P04216 161 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 OR8G3PP0DMU2 310 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 NAT2P11245 290 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ITGA2P17301 1181 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ACHEP22303 614 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 MTPNP58546 118 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 RBBP4Q09028 425 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ZP4Q12836 540 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 SELPLGQ14242 412 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 MELKQ14680 651 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ZNF74Q16587 644 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ALKBH6Q3KRA9 238 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 TTC33Q6PID6 262 aaPredicted RBP11.29□□□□□ -0.6
RPS28-204ENST00000602140 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 DHDDSQ86SQ9 333 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 GLCCI1Q86VQ1 547 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 RBM45Q8IUH3 476 aaKnown RBP11.29□□□□□ -0.6
RPS28-204ENST00000602140 SLC22A24Q8N4F4 322 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 OR4D11Q8NGI4 311 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 VANGL1Q8TAA9 524 aaPredicted RBP11.29□□□□□ -0.6
RPS28-204ENST00000602140 ADAMTS16Q8TE57 1224 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 RDH5Q92781 318 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 ZNF566Q969W8 418 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 SLC25A44Q96H78 314 aaPredicted RBP11.29□□□□□ -0.6
RPS28-204ENST00000602140 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 RABEP2Q9H5N1 569 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 NANSQ9NR45 359 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 TMEM38BQ9NVV0 291 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 LEF1Q9UJU2 399 aaPredicted RBP11.29□□□□□ -0.6
RPS28-204ENST00000602140 ANK2Q01484 3957 aa11.29□□□□□ -0.6
RPS28-204ENST00000602140 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
RPS28-204ENST00000602140 WNT9BO14905 357 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 DHHO43323 396 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 ENTPD5O75356 428 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 NCR1O76036 304 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 FAM157BP0CG42 384 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 SAGP10523 405 aaPredicted RBP11.28□□□□□ -0.6
RPS28-204ENST00000602140 PCMT1P22061 227 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 REP15Q6BDI9 236 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
RPS28-204ENST00000602140 SLC30A7Q8NEW0 376 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 DYDC1Q8WWB3 177 aa11.28□□□□□ -0.6
RPS28-204ENST00000602140 YIPF5Q969M3 257 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms