RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 THTPAQ9BU02 230 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 MOV10Q9HCE1 1003 aaKnown RBP14.73□□□□□ -0.05
TRIM28-215ENST00000601150 KRCC1Q9NPI7 259 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-215ENST00000601150 BEX4Q9NWD9 120 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-215ENST00000601150 STX18Q9P2W9 335 aaKnown RBP14.73□□□□□ -0.05
TRIM28-215ENST00000601150 ROS1P08922 2347 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 TRAV27A0A087WT01 109 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 CENPBD1B2RD01 187 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 GYG2O15488 501 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 SEC14L2O76054 403 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 GADD45GO95257 159 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ACADSP16219 412 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 CLRN1P58418 232 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 MS4A2Q01362 244 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 TAF11Q15544 211 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 TESK1Q15569 626 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF672Q499Z4 452 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ARMC4Q5T2S8 1044 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF813Q6ZN06 617 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF627Q7L945 461 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ZDHHC21Q8IVQ6 265 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 CCDC36Q8IYA8 594 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-215ENST00000601150 OR4K5Q8NGD3 323 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 OR52J3Q8NH60 311 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 POP5Q969H6 163 aaKnown RBP14.72□□□□□ -0.05
TRIM28-215ENST00000601150 FBXW5Q969U6 566 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ASB9Q96DX5 294 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 FAM46AQ96IP4 442 aaKnown RBP14.72□□□□□ -0.05
TRIM28-215ENST00000601150 CLPTM1LQ96KA5 538 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 ALPK1Q96QP1 1244 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 TNFRSF13CQ96RJ3 184 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 SEPHS2Q99611 448 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 FUZQ9BT04 418 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 CXXC4Q9H2H0 198 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 TXNIPQ9H3M7 391 aa14.72□□□□□ -0.05
TRIM28-215ENST00000601150 TCRBV5S2A0A599 114 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 SHISA9B4DS77 424 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 CDC42EP2O14613 210 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 STAMBPO95630 424 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 TUBA1BP68363 451 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 TUBA4AP68366 448 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 RUNX1T1Q06455 604 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 FHL1Q13642 323 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 SEC23BQ15437 767 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 ZBED5Q49AG3 693 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 LRFN4Q6PJG9 635 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 SLC22A25Q6T423 547 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 TUBA1AQ71U36 451 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 PIWIL3Q7Z3Z3 882 aaKnown RBP14.71□□□□□ -0.05
TRIM28-215ENST00000601150 DEPDC4Q8N2C3 294 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 LRRC75AQ8NAA5 344 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 NOXO1Q8NFA2 376 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 NEUROG1Q92886 237 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 CCDC124Q96CT7 223 aaKnown RBP14.71□□□□□ -0.05
TRIM28-215ENST00000601150 LRGUKQ96M69 825 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 FOXB1Q99853 325 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 MRPL13Q9BYD1 178 aaKnown RBP14.71□□□□□ -0.05
TRIM28-215ENST00000601150 NDEL1Q9GZM8 345 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 MAGIXQ9H6Y5 334 aa14.71□□□□□ -0.05
TRIM28-215ENST00000601150 SH3PXD2BA1X283 911 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 TRMUO75648 421 aaKnown RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 IGHMP01871 453 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 QDPRP09417 244 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 RRM2P31350 389 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 OMPP47874 163 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 LIMS1P48059 325 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 CDH11P55287 796 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 CTXN1P60606 82 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 RPL27P61353 136 aaKnown RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 SPOCK1Q08629 439 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 TRAP1Q12931 704 aaKnown RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 TOP3AQ13472 1001 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 HIST3H3Q16695 136 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 C3orf36Q3SXR2 165 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 IGFN1Q86VF2 1251 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 FAM169BQ8N8A8 192 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 SYT14Q8NB59 555 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 SLC7A6OSQ96CW6 309 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 SLC38A2Q96QD8 506 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 BTBD10Q9BSF8 475 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 TRIM15Q9C019 465 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 CISD1Q9NZ45 108 aaKnown RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 CRNNQ9UBG3 495 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-215ENST00000601150 AURKCQ9UQB9 309 aa14.7□□□□□ -0.06
TRIM28-215ENST00000601150 IGHV1-18A0A0C4DH31 117 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 DHHO43323 396 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 TMCC2O75069 709 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 ENTPD5O75356 428 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 B4GALT1P15291 398 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 CBR1P16152 277 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 RPL4P36578 427 aaKnown RBP14.69□□□□□ -0.06
TRIM28-215ENST00000601150 CAPZA2P47755 286 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 FAM205BPQ63HN1 556 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 SPNS3Q6ZMD2 512 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 TMEM171Q8WVE6 324 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 IGFBPL1Q8WX77 278 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 MCHR2Q969V1 340 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 POU2F3Q9UKI9 436 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF346Q9UL40 294 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms