RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 FZD7O75084 574 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 HIST1H2ABP04908 130 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF14P17017 642 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 COL8A2P25067 703 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 DUSP7Q16829 419 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 ENTPD8Q5MY95 495 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 TTC33Q6PID6 262 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 SLC35D2Q76EJ3 337 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 HIST3H2AQ7L7L0 130 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 PTOV1Q86YD1 416 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 SKA3Q8IX90 412 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 LRRC17Q8N6Y2 441 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 OR6T1Q8NGN1 323 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 FGFBP3Q8TAT2 258 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 SLC26A7Q8TE54 656 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 HIST1H2ACQ93077 130 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 ARHGDIGQ99819 225 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 SH3GL3Q99963 347 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 TMEM43Q9BTV4 400 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 RNF121Q9H920 327 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 LPAR2Q9HBW0 351 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 MYEF2Q9P2K5 600 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 LEF1Q9UJU2 399 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 NDUFAF1Q9Y375 327 aa15.14■□□□□ 0.01
SHKBP1-223ENST00000600552 ANGPT2O15123 496 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 UBL3O95164 117 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 HPXP02790 462 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 TACSTD2P09758 323 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 FAM157BP0CG42 384 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 NAT2P11245 290 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 CCL2P13500 99 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF35P13682 527 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 NPTX1Q15818 432 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 LIPNQ5VXI9 398 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 NHLRC1Q6VVB1 395 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 WDR88Q6ZMY6 472 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 CARM1Q86X55 608 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 ICA1LQ8NDH6 482 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 GPR32P1Q8NGA4 272 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 C1orf159Q96HA4 380 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 GLTPQ9NZD2 209 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF224Q9NZL3 707 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 SLC7A7Q9UM01 511 aa15.13■□□□□ 0.01
SHKBP1-223ENST00000600552 CHP2O43745 196 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 MT-ATP6P00846 226 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 GLRXP35754 106 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 GPR6P46095 362 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 ATP4BP51164 291 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 MYBPC1Q00872 1141 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 RIN1Q13671 783 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 NFYCQ13952 458 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF613Q6PF04 617 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 OR4D11Q8NGI4 311 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 HPS1Q92902 700 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 ATP6V1G3Q96LB4 118 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF75AQ96N20 296 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 CGREF1Q99674 301 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 MS4A5Q9H3V2 200 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 RABEP2Q9H5N1 569 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 NANSQ9NR45 359 aa15.12■□□□□ 0.01
SHKBP1-223ENST00000600552 BLOC1S5-TXNDC5H3BN57 136 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 PPIHO43447 177 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 THBS2P35442 1172 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 CDH15P55291 814 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 RPS23P62266 143 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF74Q16587 644 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 NKPD1Q17RQ9 610 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 TTMPQ5BVD1 217 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 SWT1Q5T5J6 900 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 RETREG3Q86VR2 466 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 SLC22A24Q8N4F4 322 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 ADAMTS16Q8TE57 1224 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 TMEM54Q969K7 222 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF566Q969W8 418 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 OCEL1Q9H607 264 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 EVA1AQ9H8M9 152 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 CDH20Q9HBT6 801 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 TAS2R5Q9NYW4 299 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 TREM2Q9NZC2 230 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 TAAR3PQ9P1P4 343 aa15.11■□□□□ 0.01
SHKBP1-223ENST00000600552 CDC14BO60729 498 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 FMO6PO60774 539 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 FARS2O95363 451 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 THY1P04216 161 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 LCKP06239 509 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 QDPRP09417 244 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 OR8G3PP0DMU2 310 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 CD247P20963 164 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 EVX1P49640 407 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 PCBP3P57721 371 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 CLRN1P58418 232 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 RBBP4Q09028 425 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 ELFN2Q5R3F8 820 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 RGS7BPQ6MZT1 257 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 TMEM53Q6P2H8 277 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 LRFN4Q6PJG9 635 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 LINC00114Q6XXX2 140 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 PIWIL3Q7Z3Z3 882 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 NANOGNBQ7Z5D8 188 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 SYT14Q8NB59 555 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms